Afo_R009044 (Aptenodytes forsteri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Afo_R009044 T132841_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PATZ1
M08287_2.00 		Homo sapiens
CCCCDCCC
GGGHGGGG		 ChIP-seq
Schmitges et al.(2016)
Q9HBE1.MEME 		0.825 0.993
PATZ1
M08864_2.00 		Homo sapiens
NYBCHNBYBCMKYCYCYBCCMY
RKGGVRGRGRMKGVRVNDGVRN		 Misc
Kulakovskiy et al.(2013)
PATZ1_HUMAN.H11MO.0.C 		0.825 0.993
PATZ1
M10137_2.00 		Homo sapiens
NDDCCCCCCCCSH
DSGGGGGGGGHHN		 Transfac
Matys et al.(2006)
V$MAZR_01 		0.825 0.993
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R009044 C2H2 ZF 188 210
Afo_R009044 C2H2 ZF 252 273
Afo_R009044 C2H2 ZF 279 301
Afo_R009044 C2H2 ZF 309 332
Afo_R009044 C2H2 ZF 338 360
Afo_R009044 C2H2 ZF 392 414

Links

Other C2H2 ZF family TFs
Other Aptenodytes forsteri TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GD21228 Drosophila simulans FBgn0192678 I
GE23612 Drosophila yakuba FBgn0240785 I
GF17699 Drosophila ananassae FBgn0094717 I
GG11417 Drosophila erecta FBgn0103717 I
GJ10970 Drosophila virilis FBgn0198238 I
GK12852 Drosophila willistoni FBgn0214861 I
GM10256 Drosophila sechellia FBgn0165207 I
jigr1 Drosophila melanogaster FBgn0039350 D