Alligator_sinensis_CCG001391.4 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG001391.4 T132974_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Maz
M08988_2.00 		Mus musculus
YYBYYYYYYCNSYYCCWCCYYN
NRRGGWGGRRSNGRRRRRRVRR		 Misc
Kulakovskiy et al.(2013)
MAZ_MOUSE.H11MO.0.A 		0.782 0.964
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG001391.4 C2H2 ZF 1 19
Alligator_sinensis_CCG001391.4 C2H2 ZF 25 47
Alligator_sinensis_CCG001391.4 C2H2 ZF 55 78
Alligator_sinensis_CCG001391.4 C2H2 ZF 84 106
Alligator_sinensis_CCG001391.4 C2H2 ZF 110 131

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG003245.1 Alligator sinensis Alligator_sinensis_CCG003245.1 I
Cmyd_10015601 Chelonia mydas Cmyd_10015601 I
ENSBTAP00000035733-D1 Bos grunniens ENSBTAP00000035733-D1 I
ENSCPOG00000024829 Cavia porcellus ENSCPOG00000024829 I
ENSCSAG00000010775 Chlorocebus sabaeus ENSCSAG00000010775 I
ENSFALG00000000874 Ficedula albicollis ENSFALG00000000874 I
ENSMEUG00000005804 Macropus eugenii ENSMEUG00000005804 I
ENSMMUG00000019103 Macaca mulatta ENSMMUG00000019103 I
ENSMPUG00000004703 Mustela putorius furo ENSMPUG00000004703 I
ENSNLEG00000003007 Nomascus leucogenys ENSNLEG00000003007 I
ENSPANG00000010574 Papio anubis ENSPANG00000010574 I
ENSPSIG00000017106 Pelodiscus sinensis ENSPSIG00000017106 I
Myotis_brandtii_ZBTB7A_10016304 Myotis brandtii Myotis_brandtii_ZBTB7A_10016304 I
Ogr12162 Ophisaurus gracilis Ogr12162 I
Pvit_09830 Pogona vitticeps Pvit_09830 I
ZBTB7A Sus scrofa ENSSSCG00000029236 I
ZBTB7A Tursiops truncatus ENSTTRG00000006780 I
ZBTB7A Ornithorhynchus anatinus ENSOANG00000006290 I
Zbtb7a Rattus norvegicus ENSRNOG00000020161 I
ZBTB7A Pan troglodytes ENSPTRG00000010292 I
ZBTB7A Otolemur garnettii ENSOGAG00000033963 I
ZBTB7A Bos taurus ENSBTAG00000020117 I
Zbtb7a Mus musculus ENSMUSG00000035011 D
ZBTB7A Monodelphis domestica ENSMODG00000000778 I
ZBTB7A Myotis lucifugus ENSMLUG00000008667 I
ZBTB7A Homo sapiens ENSG00000178951 D
ZBTB7A Callithrix jacchus ENSCJAG00000036210 I
ZBTB7A Canis familiaris ENSCAFG00000024335 I