CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG001651.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG001651.1
T132981_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZBTB44
M01173_2.00
Homo sapiens
NNVMTGCAKYN
NRMTGCAKBNN
PBM
Lambert et al.(2019)
pTH11223
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG001651.1
C2H2 ZF
399
421
FQCPTCGVRFTRIQNLKQHMLIH
Alligator_sinensis_CCG001651.1
C2H2 ZF
427
449
FQCDRCGKKFTRAYSLKMHRLKH
Alligator_sinensis_CCG001651.1
C2H2 ZF
455
479
FRCQICSATFTSFGEYKHHMRVSRH
Alligator_sinensis_CCG001651.1
C2H2 ZF
487
511
YECKTCGAMFTNSGNLIVHLRSLNH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
48 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R002561
Calypte anna
Aan_R002561
I
0.827
Afo_R001305
Aptenodytes forsteri
Afo_R001305
I
0.827
Cmyd_10005394
Chelonia mydas
Cmyd_10005394
I
0.827
ENSAMEG00000002194
Ailuropoda melanoleuca
ENSAMEG00000002194
I
0.827
ENSAMXG00000003220
Astyanax mexicanus
ENSAMXG00000003220
I
0.827
ENSAPLG00000005984
Anas platyrhynchos
ENSAPLG00000005984
I
0.827
ENSBTAP00000030209-D1
Bos grunniens
ENSBTAP00000030209-D1
I
0.827
ENSDNOG00000000298
Dasypus novemcinctus
ENSDNOG00000000298
I
0.827
ENSFALG00000005440
Ficedula albicollis
ENSFALG00000005440
I
0.827
ENSGMOG00000011392
Gadus morhua
ENSGMOG00000011392
I
0.827
ENSLACG00000014106
Latimeria chalumnae
ENSLACG00000014106
I
0.827
ENSLOCG00000004162
Lepisosteus oculatus
ENSLOCG00000004162
I
0.827
ENSMODG00000005080
Monodelphis domestica
ENSMODG00000005080
I
0.827
ENSOARG00000014934
Ovis aries
ENSOARG00000014934
I
0.827
ENSP00000380861
Macaca fascicularis
ENSP00000380861
I
0.827
ENSPANG00000017978
Papio anubis
ENSPANG00000017978
I
0.827
ENSPFOG00000015752
Poecilia formosa
ENSPFOG00000015752
I
0.827
ENSPPYG00000004067
Pongo abelii
ENSPPYG00000004067
I
0.827
ENSPSIG00000008340
Pelodiscus sinensis
ENSPSIG00000008340
I
0.827
ENSSHAG00000009614
Sarcophilus harrisii
ENSSHAG00000009614
I
0.827
ENSTGUG00000000733
Taeniopygia guttata
ENSTGUG00000000733
I
0.827
ENSXMAG00000008381
Xiphophorus maculatus
ENSXMAG00000008381
I
0.827
Gfo_R010087
Geospiza fortis
Gfo_R010087
I
0.827
Myotis_brandtii_ZBTB44_10007766
Myotis brandtii
Myotis_brandtii_ZBTB44_10007766
I
0.827
Ogr16135
Ophisaurus gracilis
Ogr16135
I
0.827
Pvit_19205
Pogona vitticeps
Pvit_19205
I
0.827
Tal_R000886
Tyto alba
Tal_R000886
I
0.827
ZBTB44
Meleagris gallopavo
ENSMGAG00000001211
I
0.827
ZBTB44
Anolis carolinensis
ENSACAG00000017706
I
0.827
ZBTB44
Bos taurus
ENSBTAG00000009210
I
0.827
ZBTB44
Choloepus hoffmanni
ENSCHOG00000010069
I
0.827
ZBTB44
Callithrix jacchus
ENSCJAG00000009451
I
0.827
ZBTB44
Cavia porcellus
ENSCPOG00000003171
I
0.827
ZBTB44
Erinaceus europaeus
ENSEEUG00000010554
I
0.827
ZBTB44
Homo sapiens
ENSG00000196323
D
0.827
zbtb44
Gasterosteus aculeatus
ENSGACG00000000028
I
0.827
ZBTB44
Gallus gallus
ENSGALG00000001341
I
0.827
ZBTB44
Gorilla gorilla
ENSGGOG00000014960
I
0.827
zbtb44
Oryzias latipes
ENSORLG00000015218
I
0.827
ZBTB44
Vicugna pacos
ENSVPAG00000008094
I
0.827
ZBTB44
Tursiops truncatus
ENSTTRG00000010441
I
0.827
zbtb44
Takifugu rubripes
ENSTRUG00000011604
I
0.827
ZBTB44
Myotis lucifugus
ENSMLUG00000000330
I
0.827
ZBTB44
Sus scrofa
ENSSSCG00000015247
I
0.827
ZBTB44
Macaca mulatta
ENSMMUG00000022944
I
0.827
ZBTB44
Sorex araneus
ENSSARG00000005097
I
0.827
ZBTB44
Pteropus vampyrus
ENSPVAG00000012783
I
0.827
ZBTB44
Otolemur garnettii
ENSOGAG00000015683
I
0.827