CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG007633.2
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG007633.2
T133206_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG007633.2
C2H2 ZF
61
83
YSCQLCPFASHYSSHLKRHMKTH
Alligator_sinensis_CCG007633.2
C2H2 ZF
89
111
FQCPQCDYASAQLVNLTRHLRTH
Alligator_sinensis_CCG007633.2
C2H2 ZF
117
139
YHCGGCGFTCSSLGNLKRHERIH
Alligator_sinensis_CCG007633.2
C2H2 ZF
145
167
FRCGACAYRCNQSRNLKRHMLSH
Alligator_sinensis_CCG007633.2
C2H2 ZF
269
291
FACSLCPFVTHYPNHLARHMKTH
Alligator_sinensis_CCG007633.2
C2H2 ZF
297
319
FACPLCPYASAHLDNLKRHQRVH
Alligator_sinensis_CCG007633.2
C2H2 ZF
325
347
YKCALCDYACGNLANLKRHGRIH
Alligator_sinensis_CCG007633.2
C2H2 ZF
353
375
FRCGLCSYSCNQSMNLKRHMLRH
Alligator_sinensis_CCG007633.2
C2H2 ZF
381
403
FQCRDCPYTTGHWDNYKRHQKIH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSBTAG00000038710
Bos taurus
ENSBTAG00000038710
N
ENSCAFG00000010717
Canis familiaris
ENSCAFG00000010717
N
ENSP00000343023-D1
Bos grunniens
ENSP00000343023-D1
N