Alligator_sinensis_CCG012555.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG012555.1 T133296_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG012555.1 C2H2 ZF 217 240
Alligator_sinensis_CCG012555.1 C2H2 ZF 246 268
Alligator_sinensis_CCG012555.1 C2H2 ZF 419 441
Alligator_sinensis_CCG012555.1 C2H2 ZF 449 469
Alligator_sinensis_CCG012555.1 C2H2 ZF 507 528

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R005280 Calypte anna Aan_R005280 N 0.823
Afo_R016008 Aptenodytes forsteri Afo_R016008 N 0.823
ENSAPLG00000015083 Anas platyrhynchos ENSAPLG00000015083 N 0.823
ENSDORG00000009059 Dipodomys ordii ENSDORG00000009059 N 0.761
ENSFALG00000004674 Ficedula albicollis ENSFALG00000004674 N 0.796
Gfo_R006216 Geospiza fortis Gfo_R006216 N 0.796
ZNF516 Canis familiaris ENSCAFG00000000019 N 0.757
ZNF516 Cavia porcellus ENSCPOG00000020183 N 0.757
ZNF516 Equus caballus ENSECAG00000003761 N 0.757
ZNF516 Gallus gallus ENSGALG00000013660 N 0.823
ZNF516 Meleagris gallopavo ENSMGAG00000008109 N 0.821
ZNF516 Tupaia belangeri ENSTBEG00000013455 N 0.757
ZNF516 Taeniopygia guttata ENSTGUG00000009106 N 0.796