CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG014295.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG014295.1
T133317_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG014295.1
C2H2 ZF
212
234
YRCKVCPLTFFTKSEMQIHSKSH
Alligator_sinensis_CCG014295.1
C2H2 ZF
240
262
HKCPHCSKSFANASYLAQHLRIH
Alligator_sinensis_CCG014295.1
C2H2 ZF
268
290
YHCSYCEKSFRQLSHLQQHTRIH
Alligator_sinensis_CCG014295.1
C2H2 ZF
296
320
YKCPHPGCEKAFTQLSNLQSHQRQH
Alligator_sinensis_CCG014295.1
C2H2 ZF
326
348
YKCPNCYRAYTDSASLQIHLSAH
Alligator_sinensis_CCG014295.1
C2H2 ZF
356
378
YCCSMCGRAYTSETYLMKHMSKH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CIMG_10125
Coccidioides immitis
CIMG_10125
N
EURHEDRAFT_400952
Aspergillus ruber
EURHEDRAFT_400952
I
EURHEDRAFT_411825
Aspergillus ruber
EURHEDRAFT_411825
N
fgenesh1_pm.00083_#_70
Aspergillus carbonarius
fgenesh1_pm.00083_#_70
N
H101_06724
Trichophyton interdigitale
H101_06724
N
MCYG_04120
Microsporum canis
MCYG_04120
N
MCYG_04120
Arthroderma otae
MCYG_04120
N
MGYG_02491
Microsporum gypseum
MGYG_02491
N
PDE_08065
Penicillium oxalicum
PDE_08065
N
TEQG_07934
Trichophyton equinum
TEQG_07934
N
TESG_07322
Trichophyton tonsurans
TESG_07322
N