Alligator_sinensis_CCG020735.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG020735.1 T133447_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG020735.1 C2H2 ZF 120 142
Alligator_sinensis_CCG020735.1 C2H2 ZF 148 170
Alligator_sinensis_CCG020735.1 C2H2 ZF 176 198
Alligator_sinensis_CCG020735.1 C2H2 ZF 204 226
Alligator_sinensis_CCG020735.1 C2H2 ZF 232 254
Alligator_sinensis_CCG020735.1 C2H2 ZF 288 310
Alligator_sinensis_CCG020735.1 C2H2 ZF 316 338
Alligator_sinensis_CCG020735.1 C2H2 ZF 344 367
Alligator_sinensis_CCG020735.1 C2H2 ZF 373 395
Alligator_sinensis_CCG020735.1 C2H2 ZF 444 466
Alligator_sinensis_CCG020735.1 C2H2 ZF 472 494
Alligator_sinensis_CCG020735.1 C2H2 ZF 500 522
Alligator_sinensis_CCG020735.1 C2H2 ZF 528 550
Alligator_sinensis_CCG020735.1 C2H2 ZF 556 578
Alligator_sinensis_CCG020735.1 C2H2 ZF 606 626
Alligator_sinensis_CCG020735.1 C2H2 ZF 632 654
Alligator_sinensis_CCG020735.1 C2H2 ZF 660 682
Alligator_sinensis_CCG020735.1 C2H2 ZF 688 710
Alligator_sinensis_CCG020735.1 C2H2 ZF 740 762
Alligator_sinensis_CCG020735.1 C2H2 ZF 769 790
Alligator_sinensis_CCG020735.1 C2H2 ZF 796 818
Alligator_sinensis_CCG020735.1 C2H2 ZF 824 846
Alligator_sinensis_CCG020735.1 C2H2 ZF 852 874

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA028396 Oryza indica BGIOSGA028396 N
LPERR08G08160 Leersia perrieri LPERR08G08160 N
OBART08G09450 Oryza barthii OBART08G09450 N
OGLUM08G10180 Oryza glumaepatula OGLUM08G10180 N
OLONG_002957 Oryza longistaminata OLONG_002957 N
OMERI08G08060 Oryza meridionalis OMERI08G08060 N
ONIVA10G10170 Oryza nivara ONIVA10G10170 N
OPUNC08G08700 Oryza punctata OPUNC08G08700 N
ORGLA08G0080600 Oryza glaberrima ORGLA08G0080600 N
ORUFI08G10670 Oryza rufipogon ORUFI08G10670 N
OS08G0292000 Oryza sativa OS08G0292000 N