Ca_04300 (Cicer arietinum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ca_04300 T133681_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STOP1
M06801_2.00 		Arabidopsis thaliana
CCTBCMCCAGDTRHHMCYY
RRGKDDYAHCTGGKGVAGG		 Dap-seq
OMalley et al.(2016)
STOP1_col_a 		0.827 0.978
STOP1
M06802_2.00 		Arabidopsis thaliana
RCCTNCMCCRGWWRN
NYWWCYGGKGNAGGY		 Dap-seq
OMalley et al.(2016)
STOP1_colamp_a 		0.827 0.978
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_04300 C2H2 ZF 338 360
Ca_04300 C2H2 ZF 359 390

Links

Other C2H2 ZF family TFs
Other Cicer arietinum TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CG30401 Drosophila melanogaster FBgn0050401 N
GD25155 Drosophila simulans FBgn0196467 N
GE13663 Drosophila yakuba FBgn0231320 N
GF11604 Drosophila ananassae FBgn0088644 N
GG20731 Drosophila erecta FBgn0112918 N
GH21351 Drosophila grimshawi FBgn0128813 N
GI20766 Drosophila mojavensis FBgn0143501 N
GJ17111 Drosophila virilis FBgn0204288 N
GK15635 Drosophila willistoni FBgn0217640 N
GL17502 Drosophila persimilis FBgn0155105 N
GM15674 Drosophila sechellia FBgn0170590 N