Cla018945 (Citrullus lanatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cla018945 T133967_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SGR5
M06805_2.00 		Arabidopsis thaliana
WTTTTGTCTTWTHYD
HRDAWAAGACAAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_col_a 		0.811 0.976
SGR5
M06806_2.00 		Arabidopsis thaliana
WTTTGTCTYWWHBNN
NNVDWWRAGACAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_colamp_a 		0.811 0.976
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla018945 C2H2 ZF 138 159
Cla018945 C2H2 ZF 159 184

Links

Other C2H2 ZF family TFs
Other Citrullus lanatus TFs

123 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANIA_08129 Aspergillus nidulans CADANIAG00004163 N 0.000
ATEG_09249 Aspergillus terreus CADATEAG00003546 N 0.000
Bcin01g00970 Botrytis cinerea Bcin01g00970 N 0.000
BDDG_09520 Blastomyces dermatitidis BDDG_09520 N 0.000
CADAFLAG00010617 Aspergillus flavus CADAFLAG00010617 N 0.000
CADANGAG00002494 Aspergillus niger CADANGAG00002494 N 0.000
CADAORAG00009780 Aspergillus oryzae CADAORAG00009780 N 0.000
CORT_0A06620 Candida orthopsilosis CORT_0A06620 N 0.000
EURHEDRAFT_448370 Aspergillus ruber EURHEDRAFT_448370 N 0.000
fgenesh1_pm.00866_#_602 Aspergillus carbonarius fgenesh1_pm.00866_#_602 N 0.000
GGTG_09020 Gaeumannomyces graminis GGTG_09020 N 0.000
Pc21g18560 Penicillium chrysogenum Pc21g18560 N 0.000
PCH_Pc21g18560 Penicillium rubens PCH_Pc21g18560 N 0.000
PDE_09868 Penicillium oxalicum PDE_09868 I 0.000
PEX1_080650 Penicillium expansum PEX1_080650 N 0.000
PV11_08622 Exophiala sideris PV11_08622 N 0.000