CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gfo_R003045
(
Geospiza fortis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Gfo_R003045
T135686_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R003045
C2H2 ZF
606
627
YKCLECGDSFALEKSLTQHYDR
Gfo_R003045
C2H2 ZF
634
658
VTCNHCTKNLVFYNKCSLLSHARGH
Gfo_R003045
C2H2 ZF
742
763
LKCLECNEVFQDETSLATHFQQ
Gfo_R003045
C2H2 ZF
771
793
KTCNICQMLLPNQCSFASHQRIH
Gfo_R003045
C2H2 ZF
830
853
FRCVHCNVVYSDVAALKSHIQGCH
Gfo_R003045
C2H2 ZF
858
881
YKCPICPMAFKSAPSTHSHAYTQH
Gfo_R003045
C2H2 ZF
893
915
YKCSMCDTVFTLQPLLYRHFDQH
Gfo_R003045
C2H2 ZF
924
947
FKCPDCSLLYAQKQLMMDHIKSMH
Gfo_R003045
C2H2 ZF
1012
1035
WTCWECDRLFTQRDVYISHMRKEH
Gfo_R003045
C2H2 ZF
1075
1101
CICRHCPDSRRTFTKRLMLEKHIQLMH
Gfo_R003045
C2H2 ZF
1193
1216
YQCRECGLCYTSHVSLSRHLFIVH
Gfo_R003045
C2H2 ZF
1249
1270
RCKVCAKTFETEAALNTHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Geospiza fortis
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R013274
Calypte anna
Aan_R013274
N
0.822
ZNF532
Taeniopygia guttata
ENSTGUG00000017487
N
0.822