Gfo_R005435 (Geospiza fortis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gfo_R005435 T135722_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R005435 C2H2 ZF 168 189
Gfo_R005435 C2H2 ZF 198 225
Gfo_R005435 C2H2 ZF 231 255

Links

Other C2H2 ZF family TFs
Other Geospiza fortis TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R013348 Calypte anna Aan_R013348 N 0.827
Afo_R001247 Aptenodytes forsteri Afo_R001247 N 0.797
Afo_R010197 Aptenodytes forsteri Afo_R010197 N 0.796
BGLB007421 Biomphalaria glabrata BGLB007421 N 0.796
CLEC011940 Cimex lectularius CLEC011940 N 0.779
ENSACAG00000006940 Anolis carolinensis ENSACAG00000006940 N 0.824
ENSGALG00000026237 Gallus gallus ENSGALG00000026237 N 0.797
ENSOCUG00000000219 Oryctolagus cuniculus ENSOCUG00000000219 N 0.797
ENSSARG00000013900 Sorex araneus ENSSARG00000013900 N 0.823
ENSTBEG00000012996 Tupaia belangeri ENSTBEG00000012996 N 0.824
ENSVPAG00000008994 Vicugna pacos ENSVPAG00000008994 N 0.824
HelroG92919 Helobdella robusta HelroG92919 N 0.788
RPRC013047 Rhodnius prolixus RPRC013047 N 0.798
Tal_R007774 Tyto alba Tal_R007774 N 0.827
ZIC1 Ochotona princeps ENSOPRG00000011909 N 0.823
ZIC1 Myotis lucifugus ENSMLUG00000003411 N 0.823
ZIC2 Ochotona princeps ENSOPRG00000007553 N 0.801
Zic2 Dipodomys ordii ENSDORG00000012707 N 0.801
zic3 Takifugu rubripes ENSTRUG00000006671 N 0.802
ZIC3 Tursiops truncatus ENSTTRG00000003415 N 0.797
ZIC4 Macaca mulatta ENSMMUG00000004741 I 0.824
ZIC4 Homo sapiens ENSG00000174963 D 0.824
ZIC4 Echinops telfairi ENSETEG00000003182 N 0.804