Gfo_R006405 (Geospiza fortis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gfo_R006405 T135741_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB2
M04595_2.00 		Homo sapiens
NNTYCCGGTWMH
DKWACCGGRANN		 SELEX
Yin et al.(2017)
ZBTB2_eDBD_HT-SELEX 		0.824 0.985
ZBTB2
M10284_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZBTB2_Q3_01 		0.824 0.985
ZBTB2
M10285_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZBTB2_Q3 		0.824 0.985
ZBTB2
M04596_2.00 		Homo sapiens
GTTTCCGGTAMY
RKTACCGGAAAC		 SELEX
Yin et al.(2017)
ZBTB2_eDBD_Methyl-HT-SELEX 		0.824 0.985
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R006405 C2H2 ZF 361 383
Gfo_R006405 C2H2 ZF 388 409
Gfo_R006405 C2H2 ZF 446 466

Links

Other C2H2 ZF family TFs
Other Geospiza fortis TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R009700 Calypte anna Aan_R009700 I 0.827
Afo_R014821 Aptenodytes forsteri Afo_R014821 I 0.827
Alligator_sinensis_CCG001947.1 Alligator sinensis Alligator_sinensis_CCG001947.1 I 0.827
Brh_R011452 Buceros rhinoceros Brh_R011452 I 0.827
Cmyd_10007876 Chelonia mydas Cmyd_10007876 I 0.827
ENSAMEG00000011098 Ailuropoda melanoleuca ENSAMEG00000011098 I 0.824
ENSAMXG00000006249 Astyanax mexicanus ENSAMXG00000006249 I 0.778
ENSAPLG00000011819 Anas platyrhynchos ENSAPLG00000011819 I 0.827
ENSCPOG00000002040 Cavia porcellus ENSCPOG00000002040 I 0.824
ENSCSAG00000014259 Chlorocebus sabaeus ENSCSAG00000014259 I 0.824
ENSFALG00000012253 Ficedula albicollis ENSFALG00000012253 I 0.827
ENSGMOG00000007509 Gadus morhua ENSGMOG00000007509 I 0.790
ENSLOCG00000016295 Lepisosteus oculatus ENSLOCG00000016295 I 0.794
ENSMEUG00000012838 Macropus eugenii ENSMEUG00000012838 I 0.824
ENSMICG00000010578 Microcebus murinus ENSMICG00000010578 I 0.824
ENSMPUG00000010444 Mustela putorius furo ENSMPUG00000010444 I 0.824
ENSNLEG00000015384 Nomascus leucogenys ENSNLEG00000015384 I 0.824
ENSOARG00000003148 Ovis aries ENSOARG00000003148 I 0.824
ENSONIG00000013371 Oreochromis niloticus ENSONIG00000013371 I 0.798
ENSP00000323183 Macaca fascicularis ENSP00000323183 I 0.824
ENSP00000323183-D1 Bos grunniens ENSP00000323183-D1 I 0.824
ENSPPYG00000017107 Pongo abelii ENSPPYG00000017107 I 0.824
ENSPSIG00000018246 Pelodiscus sinensis ENSPSIG00000018246 I 0.827
ENSSHAG00000013043 Sarcophilus harrisii ENSSHAG00000013043 I 0.824
ENSSTOG00000021611 Ictidomys tridecemlineatus ENSSTOG00000021611 I 0.824
ENSTSYG00000000113 Tarsius syrichta ENSTSYG00000000113 I 0.817
Myotis_brandtii_ZBTB2_10021316 Myotis brandtii Myotis_brandtii_ZBTB2_10021316 I 0.824
Ogr17347 Ophisaurus gracilis Ogr17347 I 0.827
Pvit_17227 Pogona vitticeps Pvit_17227 I 0.827
Tal_R001183 Tyto alba Tal_R001183 I 0.827
ZBTB2 Sus scrofa ENSSSCG00000004090 I 0.824
Zbtb2 Rattus norvegicus ENSRNOG00000019544 I 0.824
ZBTB2 Taeniopygia guttata ENSTGUG00000011276 I 0.827
ZBTB2 Pan troglodytes ENSPTRG00000018712 I 0.824
ZBTB2 Tursiops truncatus ENSTTRG00000014190 I 0.824
zbtb2 Xenopus tropicalis XB-GENE-977864 I 0.817
ZBTB2 Anolis carolinensis ENSACAG00000006317 I 0.827
ZBTB2 Gorilla gorilla ENSGGOG00000010529 I 0.824
ZBTB2 Bos taurus ENSBTAG00000014790 I 0.824
ZBTB2 Canis familiaris ENSCAFG00000000422 I 0.824
ZBTB2 Callithrix jacchus ENSCJAG00000013393 I 0.824
ZBTB2 Dasypus novemcinctus ENSDNOG00000047729 I 0.824
Zbtb2 Dipodomys ordii ENSDORG00000013305 I 0.824
ZBTB2 Equus caballus ENSECAG00000021762 I 0.824
ZBTB2 Felis catus ENSFCAG00000022354 I 0.824
ZBTB2 Homo sapiens ENSG00000181472 D 0.824
ZBTB2 Gallus gallus ENSGALG00000012966 I 0.827
ZBTB2 Procavia capensis ENSPCAG00000013849 I 0.824
ZBTB2 Loxodonta africana ENSLAFG00000001805 I 0.824
ZBTB2 Meleagris gallopavo ENSMGAG00000012677 I 0.827
ZBTB2 Myotis lucifugus ENSMLUG00000001314 I 0.824
ZBTB2 Macaca mulatta ENSMMUG00000029475 I 0.824
ZBTB2 Monodelphis domestica ENSMODG00000016757 I 0.824
Zbtb2 Mus musculus ENSMUSG00000075327 I 0.824
ZBTB2 Ornithorhynchus anatinus ENSOANG00000003326 I 0.824
ZBTB2 Oryctolagus cuniculus ENSOCUG00000022931 I 0.824
ZBTB2 Otolemur garnettii ENSOGAG00000005262 I 0.824
zbtb2.L Xenopus laevis XB-GENE-6255749 I 0.817
zbtb2b Takifugu rubripes ENSTRUG00000018234 I 0.794
zbtb2b Gasterosteus aculeatus ENSGACG00000008691 I 0.794
zbtb2b Tetraodon nigroviridis ENSTNIG00000012263 I 0.794
zbtb2b Danio rerio ENSDARG00000028086 I 0.771