CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Myotis_brandtii_ZNF41_10006078
(
Myotis brandtii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Myotis_brandtii_ZNF41_10006078
T136315_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF41
M08245_2.00
Homo sapiens
TGGTGNYBNDYTYCC
GGRARHNVRNCACCA
ChIP-seq
Najafabadi et al.(2015b)
ZNF41
0.759
0.907
ZNF41
M08313_2.00
Homo sapiens
NNNNNBTBNCTCATKGTSYYNNNYTYCCYT
NRMARGGRARNNNRRSACMATGAGNVAVNN
ChIP-seq
Schmitges et al.(2016)
P51814_4-14.RCADE
0.759
0.907
ZNF41
M08896_2.00
Homo sapiens
YTSATKGTGBYYNDYTYCCYTGTK
MACARGGRARHNRRVCACMATSAR
Misc
Kulakovskiy et al.(2013)
ZNF41_HUMAN.H11MO.0.C
0.759
0.907
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
405
427
YVCTEYIKNFTQKSDLFEHQKIH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
461
483
YICTQCGKAFTLKSNLITHQKIH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
489
511
YKCSECGKAFSHRSYLFRHMRIH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
517
539
YECSECGRGFSQNSDLNMHQKTH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
545
567
YACSECGKAFTRKSALRMHQRIH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
573
595
YVCTECGKAFIQKSHFNTHQRIH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
601
623
YECGDCGKSFTKKSQLHVHRRIH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
629
651
YICAECGKVFTHRTNLTTHQKTH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
657
679
YTCAECGKAFSDQSNLIKHQKTH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
685
707
YKCNGCGKAFIWKSRLTIHQKSH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
713
735
YECNECGKAFIQKSTLSVHQRIH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
741
763
YVCPDCGKAFIQKSHFIAHHRIH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
769
791
YECSDCGKCFTKKSQLRVHQKIH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
798
819
ICAECGKAFTDRSNLITHQKIH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
825
847
YQCSDCGKTFTWKSRLTIHQKSH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
853
875
YECSKCGKAFIQKATLNMHQIIH
Myotis_brandtii_ZNF41_10006078
C2H2 ZF
881
903
YACTECRKAFTNRSNLIKHQKTH
Links
Other
C2H2 ZF
family TFs
Other
Myotis brandtii
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action