Pvit_07170 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_07170 T137158_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PLAG1
M06465_2.00 		Homo sapiens
CCCCCKWDGGCCCC
GGGGCCHWMGGGGG		 B1H
Mathelier et al.(2014)
MA0163.1 		0.817 0.981
PLAG1
M10286_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PLAG1_01 		0.817 0.981
PLAG1
M10287_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PLAG1_02 		0.817 0.981
PLAG1
M10288_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PLAG1_08 		0.817 0.981
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_07170 C2H2 ZF 34 56
Pvit_07170 C2H2 ZF 62 86
Pvit_07170 C2H2 ZF 92 114
Pvit_07170 C2H2 ZF 121 143
Pvit_07170 C2H2 ZF 150 172
Pvit_07170 C2H2 ZF 185 207
Pvit_07170 C2H2 ZF 213 236

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R015460 Calypte anna Aan_R015460 I 0.827
Afo_R001782 Aptenodytes forsteri Afo_R001782 I 0.827
Brh_R011668 Buceros rhinoceros Brh_R011668 I 0.827
ENSAMEG00000006089 Ailuropoda melanoleuca ENSAMEG00000006089 I 0.817
ENSAPLG00000007090 Anas platyrhynchos ENSAPLG00000007090 I 0.820
ENSCPOG00000008740 Cavia porcellus ENSCPOG00000008740 I 0.819
ENSCSAG00000014574 Chlorocebus sabaeus ENSCSAG00000014574 I 0.817
ENSFALG00000010290 Ficedula albicollis ENSFALG00000010290 I 0.827
ENSLACG00000002568 Latimeria chalumnae ENSLACG00000002568 I 0.827
ENSMMUG00000007346 Macaca mulatta ENSMMUG00000007346 I 0.817
ENSMPUG00000010446 Mustela putorius furo ENSMPUG00000010446 I 0.817
ENSNLEG00000001218 Nomascus leucogenys ENSNLEG00000001218 I 0.817
ENSOANG00000005503 Ornithorhynchus anatinus ENSOANG00000005503 I 0.827
ENSOARG00000014951 Ovis aries ENSOARG00000014951 I 0.810
ENSONIG00000009655 Oreochromis niloticus ENSONIG00000009655 I 0.789
ENSP00000325546-D1 Bos grunniens ENSP00000325546-D1 I 0.810
ENSP00000416537 Macaca fascicularis ENSP00000416537 I 0.817
ENSPANG00000009705 Papio anubis ENSPANG00000009705 I 0.817
ENSPPYG00000018602 Pongo abelii ENSPPYG00000018602 I 0.817
ENSPSIG00000017823 Pelodiscus sinensis ENSPSIG00000017823 I 0.827
ENSSHAG00000010371 Sarcophilus harrisii ENSSHAG00000010371 I 0.827
ENSSTOG00000002716 Ictidomys tridecemlineatus ENSSTOG00000002716 I 0.817
ENSTSYG00000013443 Tarsius syrichta ENSTSYG00000013443 I 0.817
Gfo_R012674 Geospiza fortis Gfo_R012674 I 0.827
Myotis_brandtii_PLAG1_10024665 Myotis brandtii Myotis_brandtii_PLAG1_10024665 I 0.817
PLAG1 Anolis carolinensis ENSACAG00000017994 I 0.827
PLAG1 Pan troglodytes ENSPTRG00000020266 I 0.817
Plag1 Rattus norvegicus ENSRNOG00000008846 I 0.816
plag1 Xenopus tropicalis XB-GENE-868443 I 0.791
PLAG1 Vicugna pacos ENSVPAG00000010729 I 0.817
PLAG1 Sus scrofa ENSSSCG00000006247 I 0.817
PLAG1 Tursiops truncatus ENSTTRG00000016849 I 0.810
PLAG1 Tupaia belangeri ENSTBEG00000013496 I 0.819
PLAG1 Taeniopygia guttata ENSTGUG00000011100 I 0.827
PLAG1 Homo sapiens ENSG00000181690 D 0.817
PLAG1 Bos taurus ENSBTAG00000004022 I 0.810
PLAG1 Canis familiaris ENSCAFG00000007051 I 0.817
PLAG1 Choloepus hoffmanni ENSCHOG00000010218 I 0.801
PLAG1 Callithrix jacchus ENSCJAG00000016621 I 0.817
Plag1 Dipodomys ordii ENSDORG00000011524 I 0.819
PLAG1 Equus caballus ENSECAG00000010773 I 0.817
PLAG1 Erinaceus europaeus ENSEEUG00000013472 I 0.817
PLAG1 Felis catus ENSFCAG00000014980 I 0.817
PLAG1 Procavia capensis ENSPCAG00000014102 I 0.817
PLAG1 Gallus gallus ENSGALG00000015407 I 0.827
PLAG1 Gorilla gorilla ENSGGOG00000026661 I 0.817
PLAG1 Loxodonta africana ENSLAFG00000013617 I 0.817
PLAG1 Meleagris gallopavo ENSMGAG00000011002 I 0.827
PLAG1 Myotis lucifugus ENSMLUG00000022542 I 0.817
Plag1 Mus musculus ENSMUSG00000003282 I 0.816
PLAG1 Oryctolagus cuniculus ENSOCUG00000006001 I 0.817
PLAG1 Otolemur garnettii ENSOGAG00000025403 I 0.812
plag1 Oryzias latipes ENSORLG00000019433 I 0.782
Tal_R003136 Tyto alba Tal_R003136 I 0.827