cassava39064.m1 (Manihot esculenta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 cassava39064.m1 T137874_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.794 0.761
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.789 0.804
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.789 0.804
AT3G53600
M01856_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7188 		0.780 0.761
AT3G53600
M00858_2.00 		Arabidopsis thaliana
NNNNRSWN
NWSYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT18 		0.780 0.761
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.768 0.674
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.765 0.739
AT3G46070
M06813_2.00 		Arabidopsis thaliana
HYHHYHTCACTYHHH
DDDRAGTGADRDDRD		 Dap-seq
OMalley et al.(2016)
AT3G46070_col_a 		0.757 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava39064.m1 C2H2 ZF 35 57
cassava39064.m1 C2H2 ZF 90 112

Links

Other C2H2 ZF family TFs
Other Manihot esculenta TFs

372 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL010031 Aedes aegypti AAEL010031 I
AALB007560 Anopheles albimanus AALB007560 I
AALB007822 Anopheles albimanus AALB007822 I
Aan_R009769 Calypte anna Aan_R009769 I
AARA007787 Anopheles arabiensis AARA007787 I
AATE012411 Anopheles atroparvus AATE012411 I
ACEP13483 Atta cephalotes ACEP13483 I
ACHR000018 Anopheles christyi ACHR000018 I
ACOM025280 Anopheles coluzzii ACOM025280 I
ACUA017871 Anopheles culicifacies ACUA017871 I
ACYPI002601 Acyrthosiphon pisum ACYPI002601 I
ADIR008037 Anopheles dirus ADIR008037 I
AEPI000467 Anopheles epiroticus AEPI000467 I
Afo_R014913 Aptenodytes forsteri Afo_R014913 I
AFUN008043 Anopheles funestus AFUN008043 I
AGAP007124 Anopheles gambiae AGAP007124 I
Alligator_sinensis_CCG001917.1 Alligator sinensis Alligator_sinensis_CCG001917.1 I
Alligator_sinensis_CCG018129.1 Alligator sinensis Alligator_sinensis_CCG018129.1 I
AMAM016192 Anopheles maculatus AMAM016192 I
AMEC000644 Anopheles melas AMEC000644 I
AMEM011707 Anopheles merus AMEM011707 I
AMIN011264 Anopheles minimus AMIN011264 I
AQUA002051 Anopheles quadriannulatus AQUA002051 I
ASTEI06898 Anopheles stephensi ASTEI06898 I
A_02746 Schistosoma haematobium A_02746 I
BGIBMGA012033 Bombyx mori BGIBMGA012033 I
BGLB011346 Biomphalaria glabrata BGLB011346 I
Brh_R005605 Buceros rhinoceros Brh_R005605 I
CapteG80741 Capitella teleta CapteG80741 I
Cflo_04912--XP_001121050.1_APIME Camponotus floridanus Cflo_04912--XP_001121050.1_APIME I
CGI_10026944 Crassostrea gigas CGI_10026944 I
CLEC012607 Cimex lectularius CLEC012607 I
CPIJ016930 Culex quinquefasciatus CPIJ016930 I
CpipJ_CPIJ016930 Culex pipiens CpipJ_CPIJ016930 I
csin111822 Clonorchis sinensis csin111822 I
D915_08809 Fasciola hepatica D915_08809 I
DAPPUDRAFT_37461 Daphnia pulex DAPPUDRAFT_37461 I
ECANG7_04949 Echinococcus canadensis ECANG7_04949 I
EmuJ_000624300 Echinococcus multilocularis EmuJ_000624300 I
ENSAMEG00000005942 Ailuropoda melanoleuca ENSAMEG00000005942 I
ENSAMEG00000015953 Ailuropoda melanoleuca ENSAMEG00000015953 I
ENSAMXG00000000487 Astyanax mexicanus ENSAMXG00000000487 I
ENSAMXG00000004351 Astyanax mexicanus ENSAMXG00000004351 I
ENSAPLG00000008024 Anas platyrhynchos ENSAPLG00000008024 I
ENSBTAP00000044112-D1 Bos grunniens ENSBTAP00000044112-D1 I
ENSBTAP00000052463-D1 Bos grunniens ENSBTAP00000052463-D1 I
ENSCPOG00000004726 Cavia porcellus ENSCPOG00000004726 I
ENSCSAG00000013709 Chlorocebus sabaeus ENSCSAG00000013709 I
ENSCSAG00000016705 Chlorocebus sabaeus ENSCSAG00000016705 I
ENSFALG00000008455 Ficedula albicollis ENSFALG00000008455 I
ENSFALG00000011861 Ficedula albicollis ENSFALG00000011861 I
ENSGALG00000019470 Gallus gallus ENSGALG00000019470 I
ENSGMOG00000019481 Gadus morhua ENSGMOG00000019481 I
ENSLACG00000005024 Latimeria chalumnae ENSLACG00000005024 I
ENSLACG00000014348 Latimeria chalumnae ENSLACG00000014348 I
ENSLOCG00000003912 Lepisosteus oculatus ENSLOCG00000003912 I
ENSLOCG00000016232 Lepisosteus oculatus ENSLOCG00000016232 I
ENSMICG00000014144 Microcebus murinus ENSMICG00000014144 I
ENSMPUG00000010593 Mustela putorius furo ENSMPUG00000010593 I
ENSMPUG00000014798 Mustela putorius furo ENSMPUG00000014798 I
ENSNLEG00000011452 Nomascus leucogenys ENSNLEG00000011452 I
ENSNLEG00000014647 Nomascus leucogenys ENSNLEG00000014647 I
ENSOARG00000004844 Ovis aries ENSOARG00000004844 I
ENSOARG00000014623 Ovis aries ENSOARG00000014623 I
ENSONIG00000000446 Oreochromis niloticus ENSONIG00000000446 I
ENSONIG00000014278 Oreochromis niloticus ENSONIG00000014278 I
ENSP00000321445 Macaca fascicularis ENSP00000321445 I
ENSP00000356857 Macaca fascicularis ENSP00000356857 I
ENSPANG00000022301 Papio anubis ENSPANG00000022301 I
ENSPANG00000024238 Papio anubis ENSPANG00000024238 I
ENSPCAG00000006459 Procavia capensis ENSPCAG00000006459 I
ENSPFOG00000010821 Poecilia formosa ENSPFOG00000010821 I
ENSPFOG00000020725 Poecilia formosa ENSPFOG00000020725 I
ENSPMAG00000000379 Petromyzon marinus ENSPMAG00000000379 I
ENSPPYG00000017022 Pongo abelii ENSPPYG00000017022 I
ENSPPYG00000018665 Pongo abelii ENSPPYG00000018665 I
ENSPSIG00000003604 Pelodiscus sinensis ENSPSIG00000003604 I
ENSPSIG00000018135 Pelodiscus sinensis ENSPSIG00000018135 I
ENSSHAG00000002801 Sarcophilus harrisii ENSSHAG00000002801 I
ENSSHAG00000004870 Sarcophilus harrisii ENSSHAG00000004870 I
ENSSSCG00000004174 Sus scrofa ENSSSCG00000004174 I
ENSSTOG00000023733 Ictidomys tridecemlineatus ENSSTOG00000023733 I
ENSSTOG00000024832 Ictidomys tridecemlineatus ENSSTOG00000024832 I
ENSXMAG00000004322 Xiphophorus maculatus ENSXMAG00000004322 I
ENSXMAG00000010332 Xiphophorus maculatus ENSXMAG00000010332 I
fgenesh2_pg.scaffold_201000026 Branchiostoma floridae fgenesh2_pg.scaffold_201000026 I
fgenesh2_pg.scaffold_201000027 Branchiostoma floridae fgenesh2_pg.scaffold_201000027 I
fgenesh2_pg.scaffold_201000028 Branchiostoma floridae fgenesh2_pg.scaffold_201000028 I
fgenesh2_pg.scaffold_201000029 Branchiostoma floridae fgenesh2_pg.scaffold_201000029 I
GB42177 Apis mellifera GB42177 I
Gfo_R006439 Geospiza fortis Gfo_R006439 I
gw.912.11.1 Branchiostoma floridae gw.912.11.1 I
HelroG188977 Helobdella robusta HelroG188977 I
HHAL000695-PA Halyomorpha halys HHAL000695-PA I
Hsal_01862--XP_001122645.1_APIME Harpegnathos saltator Hsal_01862--XP_001122645.1_APIME I
ISCW019706 Ixodes scapularis ISCW019706 I
KGM_20305 Danaus plexippus KGM_20305 I
L798_06836 Zootermopsis nevadensis L798_06836 I
LDEC005027 Leptinotarsa decemlineata LDEC005027 I
LLOJ001927 Lutzomyia longipalpis LLOJ001927 I
LotgiG99224 Lottia gigantea LotgiG99224 I
MCOS_0000023201 Mesocestoides corti MCOS_0000023201 I
MSC Anolis carolinensis ENSACAG00000014585 I
MSC Bos taurus ENSBTAG00000005404 I
MSC Canis familiaris ENSCAFG00000007923 I
MSC Callithrix jacchus ENSCJAG00000007766 I
msc Danio rerio ENSDARG00000045353 I
MSC Dasypus novemcinctus ENSDNOG00000019019 I
MSC Equus caballus ENSECAG00000008333 I
MSC Erinaceus europaeus ENSEEUG00000005021 I
MSC Homo sapiens ENSG00000178860 D
msc Gasterosteus aculeatus ENSGACG00000002802 I
MSC Gorilla gorilla ENSGGOG00000009955 I
MSC Loxodonta africana ENSLAFG00000002649 I
MSC Myotis lucifugus ENSMLUG00000008572 I
MSC Macaca mulatta ENSMMUG00000000947 I
MSC Monodelphis domestica ENSMODG00000007225 I
Msc Mus musculus ENSMUSG00000025930 D
MSC Oryctolagus cuniculus ENSOCUG00000007208 I
MSC Otolemur garnettii ENSOGAG00000013827 I
msc Oryzias latipes ENSORLG00000008030 I
MSC Procavia capensis ENSPCAG00000004330 I
MSC Pan troglodytes ENSPTRG00000020339 I
MSC Pteropus vampyrus ENSPVAG00000009083 I
Msc Rattus norvegicus ENSRNOG00000007540 I
MSC Sus scrofa ENSSSCG00000006187 I
MSC Tupaia belangeri ENSTBEG00000014659 I
MSC Taeniopygia guttata ENSTGUG00000011502 I
msc Tetraodon nigroviridis ENSTNIG00000008188 I
msc Takifugu rubripes ENSTRUG00000012425 I
MSC Tursiops truncatus ENSTTRG00000017260 I
MSC Vicugna pacos ENSVPAG00000000378 I
msc Xenopus tropicalis XB-GENE-978233 I
Myotis_brandtii_MSC_10031663 Myotis brandtii Myotis_brandtii_MSC_10031663 I
Myotis_brandtii_TCF21_10035690 Myotis brandtii Myotis_brandtii_TCF21_10035690 I
Ogr02938 Ophisaurus gracilis Ogr02938 I
PHUM294350 Pediculus humanus PHUM294350 I
PPAI008462 Phlebotomus papatasi PPAI008462 I
Pvit_15024 Pogona vitticeps Pvit_15024 I
RPRC001590 Rhodnius prolixus RPRC001590 I
Sakowv30031408m.g Saccoglossus kowalevskii Sakowv30031408m.g I
SCUD_0001558401 Schistosoma curassoni SCUD_0001558401 I
SINV12414 Solenopsis invicta SINV12414 I
Sjc_0073180 Schistosoma japonicum Sjc_0073180 I
SMAR006929 Strigamia maritima SMAR006929 I
Smp_022610 Schistosoma mansoni Smp_022610 I
SMRZ_0001749101 Schistosoma margrebowiei SMRZ_0001749101 I
SMTD_0000660301 Schistosoma mattheei SMTD_0000660301 I
SPU_012008 Strongylocentrotus purpuratus SPU_012008 I
T265_00953 Opisthorchis viverrini T265_00953 I
TASK_0000025401 Taenia asiatica TASK_0000025401 I
TC002349 Tribolium castaneum TC002349 I
TCF21 Anolis carolinensis ENSACAG00000010325 I
TCF21 Bos taurus ENSBTAG00000021827 I
TCF21 Canis familiaris ENSCAFG00000000205 I
TCF21 Callithrix jacchus ENSCJAG00000002811 I
TCF21 Cavia porcellus ENSCPOG00000024201 I
tcf21 Danio rerio ENSDARG00000036869 I
TCF21 Dasypus novemcinctus ENSDNOG00000042846 I
TCF21 Equus caballus ENSECAG00000019197 I
TCF21 Echinops telfairi ENSETEG00000012492 I
TCF21 Felis catus ENSFCAG00000031261 I
TCF21 Homo sapiens ENSG00000118526 D
tcf21 Gasterosteus aculeatus ENSGACG00000010957 I
TCF21 Gallus gallus ENSGALG00000029024 I
TCF21 Gorilla gorilla ENSGGOG00000005460 I
TCF21 Loxodonta africana ENSLAFG00000009507 I
TCF21 Meleagris gallopavo ENSMGAG00000013117 I
TCF21 Myotis lucifugus ENSMLUG00000009194 I
TCF21 Macaca mulatta ENSMMUG00000002871 I
TCF21 Monodelphis domestica ENSMODG00000017516 I
Tcf21 Mus musculus ENSMUSG00000045680 D
TCF21 Ornithorhynchus anatinus ENSOANG00000013098 I
TCF21 Oryctolagus cuniculus ENSOCUG00000017761 I
TCF21 Otolemur garnettii ENSOGAG00000034073 I
tcf21 Oryzias latipes ENSORLG00000016491 I
TCF21 Pan troglodytes ENSPTRG00000018622 I
TCF21 Pteropus vampyrus ENSPVAG00000009085 I
Tcf21 Rattus norvegicus ENSRNOG00000016700 I
TCF21 Taeniopygia guttata ENSTGUG00000011548 I
tcf21 Tetraodon nigroviridis ENSTNIG00000016326 I
tcf21 Takifugu rubripes ENSTRUG00000003919 I
TCF21 Tursiops truncatus ENSTTRG00000009645 I
TCF21 Vicugna pacos ENSVPAG00000006271 I
tcf21 Xenopus tropicalis XB-GENE-484805 I
tcf21.L Xenopus laevis XB-GENE-484809 I
TRE_0000636201 Trichobilharzia regenti TRE_0000636201 I
TsM_000945000 Taenia solium TsM_000945000 I