CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgeneshMC_pg.C_20023
(
Mucor circinelloides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgeneshMC_pg.C_20023
T138815_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgeneshMC_pg.C_20023
C2H2 ZF
230
252
YKCTLCIKRFTRPSSLATHMHSH
estExt_fgeneshMC_pg.C_20023
C2H2 ZF
258
282
YKCVVDGCGRRFSVVSNLRRHAKIH
Links
Other
C2H2 ZF
family TFs
Other
Mucor circinelloides
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.20129s0005
Boechera stricta
Bostr.20129s0005
N
Cagra.1843s0002
Capsella grandiflora
Cagra.1843s0002
N
Carubv10009224m.g
Capsella rubella
Carubv10009224m.g
N
Carubv10020159m.g
Capsella rubella
Carubv10020159m.g
N
Ciclev10001255m.g
Citrus clementina
Ciclev10001255m.g
N
Eucgr.F01643
Eucalyptus grandis
Eucgr.F01643
N
fgenesh2_kg.2__1849__AT1G75710.1
Arabidopsis lyrata
fgenesh2_kg.2__1849__AT1G75710.1
N
GLYMA14G40450
Glycine max
GLYMA14G40450
N