CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh1_pm.sca_18_chr2_1_0000162
(
Nectria haematococca
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh1_pm.sca_18_chr2_1_0000162
T139060_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.sca_18_chr2_1_0000162
C2H2 ZF
191
215
FECYLCHRLFGTLYGLRSHLASPKH
fgenesh1_pm.sca_18_chr2_1_0000162
C2H2 ZF
220
243
YHCPSQTCHKEFITLAALINHLES
Links
Other
C2H2 ZF
family TFs
Other
Nectria haematococca
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw1.52.53.1
Nectria haematococca
e_gw1.52.53.1
N
fgenesh1_pm.00086_#_55
Aspergillus carbonarius
fgenesh1_pm.00086_#_55
N
FGRRES_11262
Fusarium graminearum
FGRRES_11262
N
FPSE_02409
Fusarium pseudograminearum
FPSE_02409
N
NechaG51266
Fusarium solani
NechaG51266
N
PMAA_039250
Talaromyces marneffei
PMAA_039250
N
PMAA_039250
Penicillium marneffei
PMAA_039250
N