CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgeneshPB_pg.56__28
(
Phycomyces blakesleeanus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgeneshPB_pg.56__28
T140000_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgeneshPB_pg.56__28
C2H2 ZF
101
123
HRCPECPYETDKKSNFDRHTKTH
fgeneshPB_pg.56__28
C2H2 ZF
130
151
FCCPKCPKKYTKNYNLKRHINQ
Links
Other
C2H2 ZF
family TFs
Other
Phycomyces blakesleeanus
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA002989
Oryza indica
BGIOSGA002989
N
LPERR01G06800
Leersia perrieri
LPERR01G06800
N
OB01G17220
Oryza brachyantha
OB01G17220
N
OBART01G07200
Oryza barthii
OBART01G07200
N
OGLUM01G08130
Oryza glumaepatula
OGLUM01G08130
N
OLONG_003085
Oryza longistaminata
OLONG_003085
N
OMERI01G07120
Oryza meridionalis
OMERI01G07120
N
ONIVA01G09240
Oryza nivara
ONIVA01G09240
N
ORUFI01G07750
Oryza rufipogon
ORUFI01G07750
N
OS01G0213300
Oryza sativa
OS01G0213300
N