CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw1.4.529.1
(
Phycomyces blakesleeanus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
gw1.4.529.1
T140079_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.4.529.1
C2H2 ZF
22
46
LQCHWNDCGATAAKRDHLTSHLRVH
gw1.4.529.1
C2H2 ZF
52
74
HPCTICKKPFKRPQDLKKHERTH
Links
Other
C2H2 ZF
family TFs
Other
Phycomyces blakesleeanus
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LPERR03G08110
Leersia perrieri
LPERR03G08110
N
OBART03G09030
Oryza barthii
OBART03G09030
N
OGLUM03G09150
Oryza glumaepatula
OGLUM03G09150
N
OLONG_002363
Oryza longistaminata
OLONG_002363
N
OMERI03G08460
Oryza meridionalis
OMERI03G08460
N
ONIVA03G09560
Oryza nivara
ONIVA03G09560
N
OPUNC03G08700
Oryza punctata
OPUNC03G08700
N
ORGLA03G0087600
Oryza glaberrima
ORGLA03G0087600
N
ORUFI03G09190
Oryza rufipogon
ORUFI03G09190
N