CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22007931m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22007931m.g
T140685_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22007930m.p
C2H2 ZF
93
116
YQCKMCDQVFTTKSDMLIHCQQIH
Ocbimv22007930m.p
C2H2 ZF
123
145
YKCPTCLKCFANSSYLSQHARIH
Ocbimv22007930m.p
C2H2 ZF
151
173
YRCEICERKFTQLSHLQQHIRTH
Ocbimv22007930m.p
C2H2 ZF
179
203
YKCLHPGCGKAFSQLSNLQSHSRSH
Ocbimv22007930m.p
C2H2 ZF
209
231
YRCNSCYKCYADEASLREHIPKH
Ocbimv22007930m.p
C2H2 ZF
240
262
HICRICGKSYTQETYLTRHMAKH
Ocbimv22007931m.p
C2H2 ZF
93
116
YQCKMCDQVFTTKSDMLIHCQQIH
Ocbimv22007931m.p
C2H2 ZF
123
145
YKCPTCLKCFANSSYLSQHARIH
Ocbimv22007931m.p
C2H2 ZF
151
173
YRCEICERKFTQLSHLQQHIRTH
Ocbimv22007931m.p
C2H2 ZF
179
203
YKCLHPGCGKAFSQLSNLQSHSRSH
Ocbimv22007931m.p
C2H2 ZF
209
231
YRCNSCYKCYADEASLREHIPKH
Ocbimv22007931m.p
C2H2 ZF
240
262
HICRICGKSYTQETYLTRHMAKH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000004614
Ailuropoda melanoleuca
ENSAMEG00000004614
N
ENSCPOG00000026737
Cavia porcellus
ENSCPOG00000026737
N
ENSDNOG00000039410
Dasypus novemcinctus
ENSDNOG00000039410
N
ENSMGAG00000017052
Meleagris gallopavo
ENSMGAG00000017052
N
ZNF407
Callithrix jacchus
ENSCJAG00000003204
N