CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22014607m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22014607m.g
T140946_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22014607m.p
C2H2 ZF
164
185
YQCERCGKVFAYRYYRDKHLKY
Ocbimv22014607m.p
C2H2 ZF
196
219
FPCHLCTRSFEKRDRLRIHVLHVH
Ocbimv22014607m.p
C2H2 ZF
225
247
HKCSVCGKSFSQSSSLNKHMRVH
Ocbimv22014607m.p
C2H2 ZF
253
275
YKCVYCSKAFTASSILRTHIRQH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A_00482
Schistosoma haematobium
A_00482
N
0.787
A_01498
Schistosoma haematobium
A_01498
N
0.787
D915_05868
Fasciola hepatica
D915_05868
N
0.787
D918_09842
Trichuris suis
D918_09842
N
0.793