CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30000590m.g
(
Saccoglossus kowalevskii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Sakowv30000590m.g
T142175_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23920446_peptide
C2H2 ZF
271
295
HECHCSTCGKQFTDEKHLQRHKKMH
23920446_peptide
C2H2 ZF
301
323
HKCEVCGMAFIRFDHKRRHEKTH
23920446_peptide
C2H2 ZF
329
351
FDCDLCDKAFTRHSHLKRHERLH
23920446_peptide
C2H2 ZF
357
379
FKCDLCEKTYIDPSHLSRHKLTH
23920447_peptide
C2H2 ZF
271
295
HECHCSTCGKQFTDEKHLQRHKKMH
23920447_peptide
C2H2 ZF
301
323
HKCEVCGMAFIRFDHKRRHEKTH
23920447_peptide
C2H2 ZF
329
351
FDCDLCDKAFTRHSHLKRHERLH
23920447_peptide
C2H2 ZF
357
379
FKCDLCEKTYIDPSHLSRHKLTH
Links
Other
C2H2 ZF
family TFs
Other
Saccoglossus kowalevskii
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bm8667
Brugia malayi
Bm8667
N
BTMF_0000240201
Brugia timori
BTMF_0000240201
N
nAv.1.0.1.g08757
Acanthocheilonema viteae
nAv.1.0.1.g08757
N
nDi.2.2.2.g05061
Dirofilaria immitis
nDi.2.2.2.g05061
N
nLs.2.1.2.g08060
Litomosoides sigmodontis
nLs.2.1.2.g08060
N
OFLC_0000393401
Onchocerca flexuosa
OFLC_0000393401
N
WBGene00238815
Onchocerca volvulus
WBGene00238815
N
WUBG_03444
Wuchereria bancrofti
WUBG_03444
N