CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_030_00311
(
Aquilegia coerulea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Aquca_030_00311
T142552_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_030_00311.1
C2H2 ZF
13
34
CYYCDREFDDEKILVQHQKARH
Aquca_030_00311.1
C2H2 ZF
35
58
FKCHVCHKKLSTAGGMAIHVLQVH
Aquca_030_00311.2
C2H2 ZF
13
34
CYYCDREFDDEKILVQHQKARH
Aquca_030_00311.2
C2H2 ZF
35
58
FKCHVCHKKLSTAGGMAIHVLQVH
Aquca_030_00311.4
C2H2 ZF
13
34
CYYCDREFDDEKILVQHQKARH
Aquca_030_00311.4
C2H2 ZF
35
58
FKCHVCHKKLSTAGGMAIHVLQVH
Links
Other
C2H2 ZF
family TFs
Other
Aquilegia coerulea
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CIMG_00087
Coccidioides immitis
CIMG_00087
I
CPC735_060480
Coccidioides posadasii
CPC735_060480
I
fgeneshPB_pg.2__705
Phycomyces blakesleeanus
fgeneshPB_pg.2__705
I
GLOINDRAFT_181922
Rhizophagus irregularis
GLOINDRAFT_181922
I
GLOINDRAFT_343272
Rhizophagus irregularis
GLOINDRAFT_343272
I
GLOINDRAFT_349729
Rhizophagus irregularis
GLOINDRAFT_349729
I
PAN0_015c5180
Pseudozyma antarctica
PAN0_015c5180
I
PHSY_002311
Pseudozyma hubeiensis
PHSY_002311
I
PSEUBRA_SCAF18g04670
Pseudozyma brasiliensis
PSEUBRA_SCAF18g04670
I
sr16104
Sporisorium reilianum
sr16104
I
UHOR_07508
Ustilago hordei
UHOR_07508
I
UM05773
Ustilago maydis
UM05773
I