Aquca_049_00144 (Aquilegia coerulea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Aquca_049_00144 T142556_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
JKD
M06818_2.00 		Arabidopsis thaliana
HHNWWTTTTGTCKTTTWBYD
HRVWAAAMGACAAAAWWNDD		 Dap-seq
OMalley et al.(2016)
JKD_col_a 		0.794 0.929
IDD1
M06824_2.00 		Arabidopsis thaliana
DNTTTTGTCKTTTWBYD
HRVWAAAMGACAAAANH		 Dap-seq
OMalley et al.(2016)
At5g66730_colamp_a 		0.764 0.905
IDD1
M06825_2.00 		Arabidopsis thaliana
WDTTTTGTCKTTTWNYD
HRNWAAAMGACAAAAHW		 Dap-seq
OMalley et al.(2016)
At5g66730_col 		0.764 0.905
IDD7
M06803_2.00 		Arabidopsis thaliana
NDDTTTTGTCKTTTWBYD
HRVWAAAMGACAAAAHHN		 Dap-seq
OMalley et al.(2016)
IDD7_col_a 		0.764 0.905
IDD4
M06809_2.00 		Arabidopsis thaliana
WWTTTTGTCKTTTWSYD
HRSWAAAMGACAAAAWW		 Dap-seq
OMalley et al.(2016)
IDD4_col_a 		0.764 0.833
MGP
M06795_2.00 		Arabidopsis thaliana
HNHDWTTTTGTCKTTTWNYD
HRNWAAAMGACAAAAWHDND		 Dap-seq
OMalley et al.(2016)
MGP_col_a 		0.764 0.833
MGP
M06796_2.00 		Arabidopsis thaliana
NNDTTTTGTCKTTTWBYD
HRVWAAAMGACAAAAHNN		 Dap-seq
OMalley et al.(2016)
MGP_colamp_a 		0.764 0.833
IDD5
M06807_2.00 		Arabidopsis thaliana
DNTTTTGTCKTTTTSYD
HRSAAAAMGACAAAANH		 Dap-seq
OMalley et al.(2016)
IDD5_colamp_a 		0.759 0.857
IDD5
M06808_2.00 		Arabidopsis thaliana
WTTTTGTCKTTTWSYD
HRSWAAAMGACAAAAW		 Dap-seq
OMalley et al.(2016)
IDD5_col 		0.759 0.857
AT1G14580
M06797_2.00 		Arabidopsis thaliana
NNNWWTTTTGTCKTTTWSYD
HRSWAAAMGACAAAAWWNNN		 Dap-seq
OMalley et al.(2016)
At1g14580_col_a 		0.759 0.810
AT1G14580
M06798_2.00 		Arabidopsis thaliana
NNTTTTGTCKTTTWSYD
HRSWAAAMGACAAAANN		 Dap-seq
OMalley et al.(2016)
At1g14580_colamp_a 		0.759 0.810
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_049_00144.1 C2H2 ZF 154 175
Aquca_049_00144.1 C2H2 ZF 175 200

Links

Other C2H2 ZF family TFs
Other Aquilegia coerulea TFs

603 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA005839 Oryza indica BGIOSGA005839 N
OB02G35300 Oryza brachyantha OB02G35300 N
OBART02G28020 Oryza barthii OBART02G28020 N
OGLUM02G28580 Oryza glumaepatula OGLUM02G28580 N
OMERI02G27200 Oryza meridionalis OMERI02G27200 N
ONIVA02G31120 Oryza nivara ONIVA02G31120 N
OPUNC02G25720 Oryza punctata OPUNC02G25720 N
ORGLA02G0240700 Oryza glaberrima ORGLA02G0240700 N
ORUFI02G29540 Oryza rufipogon ORUFI02G29540 N
OS02G0681900 Oryza sativa OS02G0681900 N
Pavir.Aa00944 Panicum virgatum Pavir.Aa00944 N
Pavir.J39953 Panicum virgatum Pavir.J39953 N
Sb04g031770 Sorghum bicolor Sb04g031770 N
Si016627m.g Setaria italica Si016627m.g N