Bostr.5325s0123 (Boechera stricta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Bostr.5325s0123 T142621_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.827 0.957
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.802 0.891
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.802 0.870
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.776 0.739
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.5325s0123.1.p C2H2 ZF 170 192
Bostr.5325s0123.1.p C2H2 ZF 216 238

Links

Other C2H2 ZF family TFs
Other Boechera stricta TFs

301 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Bb01471 Panicum virgatum Pavir.Bb01471 N 0.000
Pavir.Ga00479 Panicum virgatum Pavir.Ga00479 N 0.000
Pavir.J13519 Panicum virgatum Pavir.J13519 N 0.000