Eucgr.D02497 (Eucalyptus grandis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Eucgr.D02497 T142845_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.796 0.870
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.796 0.848
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.795 0.804
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.768 0.652
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.D02497.1 C2H2 ZF 250 272
Eucgr.D02497.1 C2H2 ZF 298 320

Links

Other C2H2 ZF family TFs
Other Eucalyptus grandis TFs

183 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL003947 Aedes aegypti AAEL003947 I
AATE018350 Anopheles atroparvus AATE018350 I
ACEP16670 Atta cephalotes ACEP16670 I
ACOM028540 Anopheles coluzzii ACOM028540 I
ACYPI002482 Acyrthosiphon pisum ACYPI002482 I
ADIR010658 Anopheles dirus ADIR010658 I
AFAF006554 Anopheles farauti AFAF006554 I
AGAP003537 Anopheles gambiae AGAP003537 I
AQUA014152 Anopheles quadriannulatus AQUA014152 I
ASIS009996 Anopheles sinensis ASIS009996 I
ASTEI09331 Anopheles stephensi ASTEI09331 I
BGIBMGA007531 Bombyx mori BGIBMGA007531 I
CLEC003829 Cimex lectularius CLEC003829 I
CLEC025104 Cimex lectularius CLEC025104 I
CPIJ009646 Culex quinquefasciatus CPIJ009646 I
CpipJ_CPIJ009646 Culex pipiens CpipJ_CPIJ009646 I
GB47059 Apis mellifera GB47059 I
GF22980 Drosophila ananassae FBgn0099974 I
GG11824 Drosophila erecta FBgn0104119 I
GH18648 Drosophila grimshawi FBgn0126115 I
GI23127 Drosophila mojavensis FBgn0145854 I
GJ23101 Drosophila virilis FBgn0210203 I
GK12114 Drosophila willistoni FBgn0214125 I
HHAL005482-PA Halyomorpha halys HHAL005482-PA I
KGM_19334 Danaus plexippus KGM_19334 I
LCUP007919 Lucilia cuprina LCUP007919 I
MDOA014587 Musca domestica MDOA014587 I
NV30328 Nasonia vitripennis NV30328 I
PHUM489940 Pediculus humanus PHUM489940 I
RPRC013755 Rhodnius prolixus RPRC013755 I
SINV13240 Solenopsis invicta SINV13240 I
TC013843 Tribolium castaneum TC013843 I
ttk Drosophila yakuba FBgn0228787 I
ttk Drosophila simulans FBgn0193021 I
ttk Drosophila pseudoobscura FBgn0075017 I
ttk Drosophila melanogaster FBgn0003870 D