CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.contig_35924
(
Carica papaya
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
evm.TU.contig_35924
T142890_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.TU.contig_35924.1
C2H2 ZF
233
254
FMCRKCGKAFAVKGDWRTHEKN
evm.TU.contig_35924.1
C2H2 ZF
253
279
KNCGKLWYCTCGSDFKHKRSLKDHIRS
Links
Other
C2H2 ZF
family TFs
Other
Carica papaya
TFs
305 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EDP45324.1
Malassezia globosa
EDP45324.1
N
0.000
estExt_fgeneshMC_pg.C_30057
Mucor circinelloides
estExt_fgeneshMC_pg.C_30057
N
0.000
estExt_fgeneshPB_pg.C_440039
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_440039
N
0.000
estExt_fgeneshPB_pg.C_50592
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_50592
N
0.000
fgeneshMC_pg.1_#_1575
Mucor circinelloides
fgeneshMC_pg.1_#_1575
N
0.000
fgeneshMC_pg.3_#_885
Mucor circinelloides
fgeneshMC_pg.3_#_885
I
0.000
fgeneshMC_pg.4_#_663
Mucor circinelloides
fgeneshMC_pg.4_#_663
N
0.000
fgeneshMC_pg.8_#_88
Mucor circinelloides
fgeneshMC_pg.8_#_88
N
0.000
fgeneshPB_pg.2__345
Phycomyces blakesleeanus
fgeneshPB_pg.2__345
N
0.000
fgeneshPB_pg.3__11
Phycomyces blakesleeanus
fgeneshPB_pg.3__11
N
0.000
GLOINDRAFT_44505
Rhizophagus irregularis
GLOINDRAFT_44505
N
0.000
gw1.8.425.1
Phycomyces blakesleeanus
gw1.8.425.1
N
0.000
K437DRAFT_222727
Tilletiaria anomala
K437DRAFT_222727
N
0.000
MELLADRAFT_31636
Melampsora laricipopulina
MELLADRAFT_31636
N
0.000
MSY001_2707
Malassezia sympodialis
MSY001_2707
N
0.000
PSEUBRA_SCAF2g02695
Pseudozyma brasiliensis
PSEUBRA_SCAF2g02695
N
0.000
RO3G_02446
Rhizopus oryzae
RO3G_02446
N
0.000
RO3G_04904
Rhizopus oryzae
RO3G_04904
N
0.000
RO3G_05037
Rhizopus oryzae
RO3G_05037
N
0.000
RO3G_06395
Rhizopus oryzae
RO3G_06395
I
0.000
RO3G_06899
Rhizopus oryzae
RO3G_06899
N
0.000
RO3G_09726
Rhizopus oryzae
RO3G_09726
N
0.000
RO3G_14274
Rhizopus oryzae
RO3G_14274
N
0.000
RO3G_16953
Rhizopus oryzae
RO3G_16953
N
0.000
sr12730
Sporisorium reilianum
sr12730
N
0.000
TRV_07259
Trichophyton verrucosum
TRV_07259
I
0.000
UHOR_02465
Ustilago hordei
UHOR_02465
I
0.000