Gorai.010G202400 (Gossypium raimondii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gorai.010G202400 T143074_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.800 0.804
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.795 0.804
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.795 0.804
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.774 0.696
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.774 0.674
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.773 0.652
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.771 0.761
AT3G46070
M06813_2.00 		Arabidopsis thaliana
HYHHYHTCACTYHHH
DDDRAGTGADRDDRD		 Dap-seq
OMalley et al.(2016)
AT3G46070_col_a 		0.763 0.804
AT3G53600
M01856_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7188 		0.762 0.761
AT3G53600
M00858_2.00 		Arabidopsis thaliana
NNNNRSWN
NWSYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT18 		0.762 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.010G202400.1 C2H2 ZF 44 66
Gorai.010G202400.1 C2H2 ZF 90 112

Links

Other C2H2 ZF family TFs
Other Gossypium raimondii TFs

466 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB03358.1 Alternaria brassicicola AB03358.1 N 0.000
ACRE_062880 Acremonium chrysogenum ACRE_062880 I 0.000
ada-1 Neurospora crassa NCU00499 D 0.000
ANIA_01536 Aspergillus nidulans CADANIAG00008163 D 0.000
ATEG_04779 Aspergillus terreus CADATEAG00007874 I 0.000
Bcin02g04140 Botrytis cinerea Bcin02g04140 N 0.000
BGHDH14_bgh02127 Blumeria graminis BGHDH14_bgh02127 I 0.000
CADANGAG00013191 Aspergillus niger CADANGAG00013191 I 0.000
CCM_06226 Cordyceps militaris CCM_06226 N 0.000
CFIO01_10230 Colletotrichum fioriniae CFIO01_10230 I 0.000
CGGC5_7534 Colletotrichum gloeosporioides CGGC5_7534 I 0.000
CH063_11966 Colletotrichum higginsianum CH063_11966 I 0.000
CHGG_05948 Chaetomium globosum CHGG_05948 I 0.000
CMQ_48 Grosmannia clavigera CMQ_48 I 0.000
Cob_12403 Colletotrichum orbiculare Cob_12403 I 0.000
COCC4DRAFT_21340 Bipolaris maydis COCC4DRAFT_21340 N 0.000
COCCADRAFT_1690 Bipolaris zeicola COCCADRAFT_1690 N 0.000
COCMIDRAFT_89716 Bipolaris oryzae COCMIDRAFT_89716 N 0.000
COCSADRAFT_92985 Bipolaris sorokiniana COCSADRAFT_92985 N 0.000
COCVIDRAFT_94504 Bipolaris victoriae COCVIDRAFT_94504 N 0.000
CPUR_05202 Claviceps purpurea CPUR_05202 I 0.000
CSUB01_03595 Colletotrichum sublineola CSUB01_03595 I 0.000
CTHT_0003390 Chaetomium thermophilum CTHT_0003390 I 0.000
estExt_fgenesh1_pg.C_30275 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_30275 N 0.000
estExt_fgenesh3_kg.C_40162 Neurospora discreta estExt_fgenesh3_kg.C_40162 I 0.000
F503_03145 Ophiostoma piceae uamh F503_03145 I 0.000
FFUJ_01033 Fusarium fujikuroi FFUJ_01033 I 0.000
fgenesh1_pg.C_scaffold_5000767 Cryphonectria parasitica fgenesh1_pg.C_scaffold_5000767 I 0.000
fgenesh1_pm.sca_1_chr1_3_0000259 Nectria haematococca fgenesh1_pm.sca_1_chr1_3_0000259 I 0.000
FGRRES_00515 Fusarium graminearum FGRRES_00515 I 0.000
FOXG_00543 Fusarium oxysporum FOXG_00543 I 0.000
FPSE_04421 Fusarium pseudograminearum FPSE_04421 I 0.000
FVEG_00971 Fusarium verticillioides FVEG_00971 I 0.000
GGTG_01969 Gaeumannomyces graminis GGTG_01969 I 0.000
GLRG_01353 Colletotrichum graminicola GLRG_01353 I 0.000
GMDG_05105 Pseudogymnoascus destructans GMDG_05105 N 0.000
H072_7690 Dactylellina haptotyla H072_7690 N 0.000
M7I_4877 Glarea lozoyensis M7I_4877 I 0.000
MAC_02987 Metarhizium acridum MAC_02987 I 0.000
MAJ_00756 Metarhizium majus MAJ_00756 I 0.000
MAM_01947 Metarhizium album MAM_01947 I 0.000
MANI_001414 Metarhizium anisopliae MANI_001414 I 0.000
MAPG_06371 Magnaporthe poae MAPG_06371 I 0.000
MBM_02315 Marssonina brunnea MBM_02315 I 0.000
MBR_03350 Metarhizium brunneum MBR_03350 I 0.000
MGG_04758 Magnaporthe oryzae MGG_04758 I 0.000
MGU_02844 Metarhizium guizhouense MGU_02844 I 0.000
MPH_00439 Macrophomina phaseolina MPH_00439 I 0.000
MYCTH_2297012 Myceliophthora thermophila MYCTH_2297012 I 0.000
NechaG90126 Fusarium solani NechaG90126 I 0.000
NEUTE1DRAFT_119203 Neurospora tetrasperma NEUTE1DRAFT_119203 I 0.000
OCS_03094 Ophiocordyceps sinensis OCS_03094 I 0.000
OIDMADRAFT_129628 Oidiodendron maius OIDMADRAFT_129628 N 0.000
PDE_06458 Penicillium oxalicum PDE_06458 I 0.000
PFICI_01318 Pestalotiopsis fici PFICI_01318 I 0.000
PMAA_009160 Penicillium marneffei PMAA_009160 I 0.000
PMAA_009160 Talaromyces marneffei PMAA_009160 I 0.000
PODANS_1_17610 Podospora anserina PODANS_1_17610 I 0.000
PTRG_07536 Pyrenophora triticirepentis PTRG_07536 N 0.000
PTT_12768 Pyrenophora teres PTT_12768 N 0.000
PVAR5_2855 Byssochlamys spectabilis PVAR5_2855 I 0.000
S40285_00620 Stachybotrys chlorohalonata S40285_00620 I 0.000
S40288_07855 Stachybotrys chartarum S40288_07855 I 0.000
SBOR_6525 Sclerotinia borealis SBOR_6525 N 0.000
SETTUDRAFT_28486 Setosphaeria turcica SETTUDRAFT_28486 N 0.000
SS1G_01411 Sclerotinia sclerotiorum SS1G_01411 N 0.000
THITE_2112457 Thielavia terrestris THITE_2112457 I 0.000
TRIATDRAFT_182347 Trichoderma atroviride TRIATDRAFT_182347 I 0.000
TRIREDRAFT_73654 Trichoderma reesei TRIREDRAFT_73654 I 0.000
TRIVIDRAFT_212339 Trichoderma virens TRIVIDRAFT_212339 I 0.000
TSTA_058790 Talaromyces stipitatus TSTA_058790 I 0.000
UCRNP2_4189 Neofusicoccum parvum UCRNP2_4189 I 0.000
UCRPA7_6727 Togninia minima UCRPA7_6727 I 0.000
V499_03811 Pseudogymnoascus pannorum V499_03811 N 0.000
VDBG_04532 Verticillium alfalfae VDBG_04532 I 0.000
VDBG_04532 Verticillium albo atrum VDBG_04532 I 0.000
W97_01077 Coniosporium apollinis W97_01077 I 0.000
X797_004019 Metarhizium robertsii X797_004019 I 0.000