MDP0000198015 (Malus domestica)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 MDP0000198015 T143189_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.822 0.891
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.803 0.935
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.799 0.717
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.799 0.696
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.796 0.891
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.796 0.891
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.796 0.891
AZF1
M01860_2.00 		Arabidopsis thaliana
NWSYDNN
NNHRSWN		 PBM
Weirauch et al.(2014)
pTH7163 		0.787 0.848
AZF1
M06826_2.00 		Arabidopsis thaliana
WCACTVWCWNH
DNWGWBAGTGW		 Dap-seq
OMalley et al.(2016)
AZF1_colamp_a 		0.787 0.848
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.776 0.696
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000198015 C2H2 ZF 107 129
MDP0000198015 C2H2 ZF 163 185

Links

Other C2H2 ZF family TFs
Other Malus domestica TFs

230 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_137096 Agaricus bisporus AGABI2DRAFT_137096 I 0.000
AGABI2DRAFT_193390 Agaricus bisporus AGABI2DRAFT_193390 I 0.000
AGABI2DRAFT_206331 Agaricus bisporus AGABI2DRAFT_206331 I 0.000
AGABI2DRAFT_223670 Agaricus bisporus AGABI2DRAFT_223670 I 0.000
Bcin05g06190 Botrytis cinerea Bcin05g06190 N 0.000
BN946_scf185008.g7 Trametes cinnabarina BN946_scf185008.g7 I 0.000
BOTBODRAFT_483871 Botryobasidium botryosum BOTBODRAFT_483871 I 0.000
CC1G_12055 Coprinopsis cinerea CC1G_12055 I 0.000
CC1G_15052 Coprinopsis cinerea CC1G_15052 I 0.000
CERSUDRAFT_46791 Ceriporiopsis subvermispora CERSUDRAFT_46791 I 0.000
CY34DRAFT_11126 Suillus luteus CY34DRAFT_11126 I 0.000
CY34DRAFT_798473 Suillus luteus CY34DRAFT_798473 I 0.000
DACRYDRAFT_21143 Dacryopinax sp DACRYDRAFT_21143 I 0.000
DACRYDRAFT_44659 Dacryopinax sp DACRYDRAFT_44659 I 0.000
estExt_Genewise1Plus.C_60615 Heterobasidion annosum estExt_Genewise1Plus.C_60615 I 0.000
fgenesh1_pg.C_scaffold_3000367 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_3000367 I 0.000
GALMADRAFT_129710 Galerina marginata GALMADRAFT_129710 I 0.000
GALMADRAFT_57068 Galerina marginata GALMADRAFT_57068 I 0.000
GLOTRDRAFT_75085 Gloeophyllum trabeum GLOTRDRAFT_75085 I 0.000
GYMLUDRAFT_42558 Gymnopus luxurians GYMLUDRAFT_42558 I 0.000
GYMLUDRAFT_46373 Gymnopus luxurians GYMLUDRAFT_46373 I 0.000
GYMLUDRAFT_98786 Gymnopus luxurians GYMLUDRAFT_98786 I 0.000
HETIRDRAFT_459989 Heterobasidion irregulare HETIRDRAFT_459989 I 0.000
HYDPIDRAFT_114430 Hydnomerulius pinastri HYDPIDRAFT_114430 I 0.000
HYDPIDRAFT_115133 Hydnomerulius pinastri HYDPIDRAFT_115133 I 0.000
K443DRAFT_672096 Laccaria amethystina K443DRAFT_672096 I 0.000
K443DRAFT_673001 Laccaria amethystina K443DRAFT_673001 I 0.000
K443DRAFT_676241 Laccaria amethystina K443DRAFT_676241 I 0.000
LACBIDRAFT_302761 Laccaria bicolor LACBIDRAFT_302761 I 0.000
M378DRAFT_15001 Amanita muscaria M378DRAFT_15001 I 0.000
M378DRAFT_15003 Amanita muscaria M378DRAFT_15003 I 0.000
M378DRAFT_161851 Amanita muscaria M378DRAFT_161851 I 0.000
M404DRAFT_489064 Pisolithus tinctorius M404DRAFT_489064 I 0.000
M404DRAFT_997952 Pisolithus tinctorius M404DRAFT_997952 I 0.000
M407DRAFT_24843 Tulasnella calospora M407DRAFT_24843 I 0.000
M413DRAFT_32150 Hebeloma cylindrosporum M413DRAFT_32150 I 0.000
M413DRAFT_442869 Hebeloma cylindrosporum M413DRAFT_442869 I 0.000
M422DRAFT_36818 Sphaerobolus stellatus M422DRAFT_36818 I 0.000
MELLADRAFT_104422 Melampsora laricipopulina MELLADRAFT_104422 I 0.000
PAXRUDRAFT_138309 Paxillus rubicundulus PAXRUDRAFT_138309 I 0.000
PAXRUDRAFT_825324 Paxillus rubicundulus PAXRUDRAFT_825324 I 0.000
PHACADRAFT_263672 Phanerochaete carnosa PHACADRAFT_263672 I 0.000
PHLGIDRAFT_108170 Phlebiopsis gigantea PHLGIDRAFT_108170 I 0.000
PHLGIDRAFT_391785 Phlebiopsis gigantea PHLGIDRAFT_391785 I 0.000
PISMIDRAFT_108067 Pisolithus microcarpus PISMIDRAFT_108067 I 0.000
PISMIDRAFT_240886 Pisolithus microcarpus PISMIDRAFT_240886 I 0.000
PISMIDRAFT_29414 Pisolithus microcarpus PISMIDRAFT_29414 I 0.000
PLEOSDRAFT_1097493 Pleurotus ostreatus PLEOSDRAFT_1097493 I 0.000
PLEOSDRAFT_1113284 Pleurotus ostreatus PLEOSDRAFT_1113284 I 0.000
PMAA_038720 Talaromyces marneffei PMAA_038720 N 0.000
PMAA_038720 Penicillium marneffei PMAA_038720 N 0.000
SCHCODRAFT_64223 Schizophyllum commune SCHCODRAFT_64223 I 0.000
SCHCODRAFT_66861 Schizophyllum commune SCHCODRAFT_66861 I 0.000
SCHCODRAFT_67234 Schizophyllum commune SCHCODRAFT_67234 D 0.000
SCLCIDRAFT_106216 Scleroderma citrinum SCLCIDRAFT_106216 I 0.000
SCLCIDRAFT_21582 Scleroderma citrinum SCLCIDRAFT_21582 I 0.000
V565_059490 Rhizoctonia solani V565_059490 I 0.000
WALSEDRAFT_59710 Wallemia sebi WALSEDRAFT_59710 I 0.000