CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000652898
(
Malus domestica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
MDP0000652898
T143236_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000652898
C2H2 ZF
226
248
VCPQCGAKFSSVTTLVDHVEKVH
MDP0000652898
C2H2 ZF
265
287
ACPKCSKGFRDPVALVEHVERDH
Links
Other
C2H2 ZF
family TFs
Other
Malus domestica
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_22262
Cicer arietinum
Ca_22262
N
0.769
gene25213-v1.0-hybrid
Fragaria vesca
gene25213-v1.0-hybrid
N
0.764
GLYMA02G31550
Glycine max
GLYMA02G31550
N
0.759
GLYMA10G17510
Glycine max
GLYMA10G17510
N
0.768
Gorai.006G137400
Gossypium raimondii
Gorai.006G137400
N
0.779
MDP0000305771
Malus domestica
MDP0000305771
N
0.827
PK23633.1
Cannabis sativa
PK23633.1
N
0.827