Pavir.Ab01903 (Panicum virgatum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pavir.Ab01903 T143305_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ab01903.1.p C2H2 ZF 63 87
Pavir.Ab01903.1.p C2H2 ZF 92 116
Pavir.Ab01903.1.p C2H2 ZF 122 146
Pavir.Ab01903.1.p C2H2 ZF 152 177
Pavir.Ab01903.2.p C2H2 ZF 58 82
Pavir.Ab01903.2.p C2H2 ZF 87 111
Pavir.Ab01903.2.p C2H2 ZF 117 141
Pavir.Ab01903.2.p C2H2 ZF 147 172

Links

Other C2H2 ZF family TFs
Other Panicum virgatum TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_26881 Aegilops tauschii F775_26881 N 0.798
GRMZM5G885700 Zea mays GRMZM5G885700 N 0.827
Pavir.Aa01761 Panicum virgatum Pavir.Aa01761 N 0.827
Sb04g022470 Sorghum bicolor Sb04g022470 N 0.822
Si017660m.g Setaria italica Si017660m.g N 0.822