Pavir.Ba01050 (Panicum virgatum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pavir.Ba01050 T143310_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.774 0.696
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.774 0.696
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.774 0.696
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.770 0.717
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ba01050.1.p C2H2 ZF 51 73
Pavir.Ba01050.1.p C2H2 ZF 114 136

Links

Other C2H2 ZF family TFs
Other Panicum virgatum TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_04014 Capronia coronata A1O1_04014 I
AGABI2DRAFT_113594 Agaricus bisporus AGABI2DRAFT_113594 I
AGABI2DRAFT_137096 Agaricus bisporus AGABI2DRAFT_137096 I
AGABI2DRAFT_187697 Agaricus bisporus AGABI2DRAFT_187697 I
AGABI2DRAFT_193390 Agaricus bisporus AGABI2DRAFT_193390 I
AGABI2DRAFT_206331 Agaricus bisporus AGABI2DRAFT_206331 I
AGABI2DRAFT_223295 Agaricus bisporus AGABI2DRAFT_223295 I
AGABI2DRAFT_223670 Agaricus bisporus AGABI2DRAFT_223670 I
BN946_scf185008.g7 Trametes cinnabarina BN946_scf185008.g7 I
BOTBODRAFT_483871 Botryobasidium botryosum BOTBODRAFT_483871 I
CADANGAG00004715 Aspergillus niger CADANGAG00004715 I
CC1G_09022 Coprinopsis cinerea CC1G_09022 I
CC1G_12055 Coprinopsis cinerea CC1G_12055 I
CC1G_13782 Coprinopsis cinerea CC1G_13782 I
CC1G_15052 Coprinopsis cinerea CC1G_15052 I
CC1G_15575 Coprinopsis cinerea CC1G_15575 I
CERSUDRAFT_133798 Ceriporiopsis subvermispora CERSUDRAFT_133798 I
CERSUDRAFT_46791 Ceriporiopsis subvermispora CERSUDRAFT_46791 I
CH063_07756 Colletotrichum higginsianum CH063_07756 I
CNA02020 Cryptococcus neoformans CNA02020 I
CNE00840 Cryptococcus neoformans CNE00840 I
CSUB01_05661 Colletotrichum sublineola CSUB01_05661 I
CY34DRAFT_11126 Suillus luteus CY34DRAFT_11126 I
CY34DRAFT_492980 Suillus luteus CY34DRAFT_492980 I
CY34DRAFT_798473 Suillus luteus CY34DRAFT_798473 I
DACRYDRAFT_21143 Dacryopinax sp DACRYDRAFT_21143 I
estExt_Genewise1Plus.C_60615 Heterobasidion annosum estExt_Genewise1Plus.C_60615 I
EuGene6000619 Heterobasidion annosum EuGene6000619 I
FOMPIDRAFT_1030155 Fomitopsis pinicola FOMPIDRAFT_1030155 I
FOMPIDRAFT_1142296 Fomitopsis pinicola FOMPIDRAFT_1142296 I
FOMPIDRAFT_1162266 Fomitopsis pinicola FOMPIDRAFT_1162266 I
GALMADRAFT_129710 Galerina marginata GALMADRAFT_129710 I
GALMADRAFT_161257 Galerina marginata GALMADRAFT_161257 I
GALMADRAFT_222679 Galerina marginata GALMADRAFT_222679 I
GALMADRAFT_235239 Galerina marginata GALMADRAFT_235239 I
GALMADRAFT_57068 Galerina marginata GALMADRAFT_57068 I
GALMADRAFT_96046 Galerina marginata GALMADRAFT_96046 I
Genemark.194_g Heterobasidion annosum Genemark.194_g I
GLOTRDRAFT_75085 Gloeophyllum trabeum GLOTRDRAFT_75085 I
GLRG_07219 Colletotrichum graminicola GLRG_07219 I
gw1.6.816.1 Heterobasidion annosum gw1.6.816.1 I
GYMLUDRAFT_200447 Gymnopus luxurians GYMLUDRAFT_200447 I
GYMLUDRAFT_42558 Gymnopus luxurians GYMLUDRAFT_42558 I
GYMLUDRAFT_42922 Gymnopus luxurians GYMLUDRAFT_42922 I
GYMLUDRAFT_46373 Gymnopus luxurians GYMLUDRAFT_46373 I
GYMLUDRAFT_98786 Gymnopus luxurians GYMLUDRAFT_98786 I
HETIRDRAFT_20153 Heterobasidion irregulare HETIRDRAFT_20153 I
HETIRDRAFT_459989 Heterobasidion irregulare HETIRDRAFT_459989 I
HYDPIDRAFT_114430 Hydnomerulius pinastri HYDPIDRAFT_114430 I
HYDPIDRAFT_115133 Hydnomerulius pinastri HYDPIDRAFT_115133 I
J056_000139 Wallemia ichthyophaga J056_000139 I
JAAARDRAFT_204099 Jaapia argillacea JAAARDRAFT_204099 I
JAAARDRAFT_31102 Jaapia argillacea JAAARDRAFT_31102 I
K443DRAFT_2600 Laccaria amethystina K443DRAFT_2600 I
K443DRAFT_672096 Laccaria amethystina K443DRAFT_672096 I
K443DRAFT_673001 Laccaria amethystina K443DRAFT_673001 I
K443DRAFT_676241 Laccaria amethystina K443DRAFT_676241 I
K443DRAFT_86263 Laccaria amethystina K443DRAFT_86263 I
LACBIDRAFT_302761 Laccaria bicolor LACBIDRAFT_302761 I
LACBIDRAFT_302769 Laccaria bicolor LACBIDRAFT_302769 I
LACBIDRAFT_308722 Laccaria bicolor LACBIDRAFT_308722 I
LACBIDRAFT_317135 Laccaria bicolor LACBIDRAFT_317135 I
M378DRAFT_124945 Amanita muscaria M378DRAFT_124945 I
M378DRAFT_15001 Amanita muscaria M378DRAFT_15001 I
M378DRAFT_15003 Amanita muscaria M378DRAFT_15003 I
M378DRAFT_161851 Amanita muscaria M378DRAFT_161851 I
M404DRAFT_489064 Pisolithus tinctorius M404DRAFT_489064 I
M404DRAFT_997952 Pisolithus tinctorius M404DRAFT_997952 I
M407DRAFT_24843 Tulasnella calospora M407DRAFT_24843 I
M408DRAFT_88636 Serendipita vermifera M408DRAFT_88636 I
M413DRAFT_310281 Hebeloma cylindrosporum M413DRAFT_310281 I
M413DRAFT_32150 Hebeloma cylindrosporum M413DRAFT_32150 I
M413DRAFT_442869 Hebeloma cylindrosporum M413DRAFT_442869 I
M413DRAFT_445487 Hebeloma cylindrosporum M413DRAFT_445487 I
M413DRAFT_446984 Hebeloma cylindrosporum M413DRAFT_446984 I
M422DRAFT_250500 Sphaerobolus stellatus M422DRAFT_250500 I
M422DRAFT_36818 Sphaerobolus stellatus M422DRAFT_36818 I
M422DRAFT_38534 Sphaerobolus stellatus M422DRAFT_38534 I
MELLADRAFT_104422 Melampsora laricipopulina MELLADRAFT_104422 I
Moror_17436 Moniliophthora roreri Moror_17436 I
Moror_4700 Moniliophthora roreri Moror_4700 I
PAXINDRAFT_170130 Paxillus involutus PAXINDRAFT_170130 I
PAXRUDRAFT_138309 Paxillus rubicundulus PAXRUDRAFT_138309 I
PAXRUDRAFT_783296 Paxillus rubicundulus PAXRUDRAFT_783296 I
PAXRUDRAFT_825324 Paxillus rubicundulus PAXRUDRAFT_825324 I
PGTG_18397 Puccinia graminis PGTG_18397 I
PHACADRAFT_263665 Phanerochaete carnosa PHACADRAFT_263665 I
PHACADRAFT_263672 Phanerochaete carnosa PHACADRAFT_263672 I
PHLGIDRAFT_108161 Phlebiopsis gigantea PHLGIDRAFT_108161 I
PHLGIDRAFT_108170 Phlebiopsis gigantea PHLGIDRAFT_108170 I
PHLGIDRAFT_110627 Phlebiopsis gigantea PHLGIDRAFT_110627 I
PHLGIDRAFT_391785 Phlebiopsis gigantea PHLGIDRAFT_391785 I
PIIN_01713 Piriformospora indica PIIN_01713 I
PILCRDRAFT_827976 Piloderma croceum PILCRDRAFT_827976 I
PISMIDRAFT_108067 Pisolithus microcarpus PISMIDRAFT_108067 I
PISMIDRAFT_240886 Pisolithus microcarpus PISMIDRAFT_240886 I
PISMIDRAFT_29414 Pisolithus microcarpus PISMIDRAFT_29414 I
PLEOSDRAFT_1097493 Pleurotus ostreatus PLEOSDRAFT_1097493 I
PLEOSDRAFT_1111862 Pleurotus ostreatus PLEOSDRAFT_1111862 I
PLEOSDRAFT_1113284 Pleurotus ostreatus PLEOSDRAFT_1113284 I
POSPLDRAFT_19733 Postia placenta POSPLDRAFT_19733 I
RHTO_02396 Rhodosporidium toruloides RHTO_02396 I
SCHCODRAFT_111379 Schizophyllum commune SCHCODRAFT_111379 I
SCHCODRAFT_269949 Schizophyllum commune SCHCODRAFT_269949 I
SCHCODRAFT_63410 Schizophyllum commune SCHCODRAFT_63410 I
SCHCODRAFT_64223 Schizophyllum commune SCHCODRAFT_64223 I
SCHCODRAFT_66861 Schizophyllum commune SCHCODRAFT_66861 I
SCHCODRAFT_67234 Schizophyllum commune SCHCODRAFT_67234 D
SCLCIDRAFT_106216 Scleroderma citrinum SCLCIDRAFT_106216 I
SCLCIDRAFT_13431 Scleroderma citrinum SCLCIDRAFT_13431 I
SCLCIDRAFT_21582 Scleroderma citrinum SCLCIDRAFT_21582 I
SERLA73DRAFT_110825 Serpula lacrymans SERLA73DRAFT_110825 I
SERLA73DRAFT_79751 Serpula lacrymans SERLA73DRAFT_79751 I
UCRPA7_4174 Togninia minima UCRPA7_4174 N
V565_059490 Rhizoctonia solani V565_059490 I
WALSEDRAFT_59710 Wallemia sebi WALSEDRAFT_59710 I