SapurV1A.0008s0970 (Salix purpurea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SapurV1A.0008s0970 T143441_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.777 0.826
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.772 0.804
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.771 0.804
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.771 0.804
AT3G46070
M06813_2.00 		Arabidopsis thaliana
HYHHYHTCACTYHHH
DDDRAGTGADRDDRD		 Dap-seq
OMalley et al.(2016)
AT3G46070_col_a 		0.762 0.804
AT3G53600
M01856_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7188 		0.761 0.717
AT3G53600
M00858_2.00 		Arabidopsis thaliana
NNNNRSWN
NWSYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT18 		0.761 0.717
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0008s0970.1.p C2H2 ZF 49 71
SapurV1A.0008s0970.1.p C2H2 ZF 96 118

Links

Other C2H2 ZF family TFs
Other Salix purpurea TFs

379 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CLUG_03901 Candida lusitaniae CLUG_03901 N 0.000
CLUG_03901 Clavispora lusitaniae CLUG_03901 N 0.000
CORT_0A06620 Candida orthopsilosis CORT_0A06620 N 0.000
e_gwh1.2.1.1777.1 Pichia stipitis e_gwh1.2.1.1777.1 N 0.000
GNLVRS01_PISO0F12061g Millerozyma farinosa GNLVRS01_PISO0F12061g N 0.000