LDEC006538 (Leptinotarsa decemlineata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 LDEC006538 T144607_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
klu
M03680_2.00 		Drosophila melanogaster
HCCRCCCACGCAH
DTGCGTGGGYGGD		 SELEX
Nitta et al.(2015)
klu_1 		0.807 0.946
klu
M03681_2.00 		Drosophila melanogaster
YMCGCCCMCGCAH
DTGCGKGGGCGKR		 SELEX
Nitta et al.(2015)
klu_2 		0.807 0.946
klu
M06114_2.00 		Drosophila melanogaster
MCACCCMCRCA
TGYGKGGGTGK		 B1H
Zhu et al.(2011)
klu_SANGER_10_FBgn0013469 		0.807 0.946
klu
M06115_2.00 		Drosophila melanogaster
NNNNMCACCCMCRCN
NGYGKGGGTGKNNNN		 B1H
Zhu et al.(2011)
klu_SOLEXA_5_FBgn0013469 		0.807 0.946
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LDEC006538-PA C2H2 ZF 378 401
LDEC006538-PA C2H2 ZF 415 437
LDEC006538-PA C2H2 ZF 443 465
LDEC006538-PA C2H2 ZF 471 493

Links

Other C2H2 ZF family TFs
Other Leptinotarsa decemlineata TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_204681 Agaricus bisporus AGABI2DRAFT_204681 N
CC1G_08004 Coprinopsis cinerea CC1G_08004 N
CERSUDRAFT_94391 Ceriporiopsis subvermispora CERSUDRAFT_94391 N
CY34DRAFT_799919 Suillus luteus CY34DRAFT_799919 N
CY34DRAFT_810199 Suillus luteus CY34DRAFT_810199 N
CY34DRAFT_92559 Suillus luteus CY34DRAFT_92559 N
fgenesh1_pg.C_scaffold_8000500 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_8000500 N
fgenesh1_pg.C_scaffold_8000526 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_8000526 N
FIBRA_01765 Fibroporia radiculosa FIBRA_01765 N
FOMPIDRAFT_1027511 Fomitopsis pinicola FOMPIDRAFT_1027511 N
FOMPIDRAFT_112416 Fomitopsis pinicola FOMPIDRAFT_112416 N
GALMADRAFT_156783 Galerina marginata GALMADRAFT_156783 N
GLOTRDRAFT_43577 Gloeophyllum trabeum GLOTRDRAFT_43577 N
GLOTRDRAFT_44070 Gloeophyllum trabeum GLOTRDRAFT_44070 N
GYMLUDRAFT_181224 Gymnopus luxurians GYMLUDRAFT_181224 N
HETIRDRAFT_317558 Heterobasidion irregulare HETIRDRAFT_317558 N
HYDPIDRAFT_137903 Hydnomerulius pinastri HYDPIDRAFT_137903 N
HYDPIDRAFT_181816 Hydnomerulius pinastri HYDPIDRAFT_181816 N
JAAARDRAFT_207038 Jaapia argillacea JAAARDRAFT_207038 N
JAAARDRAFT_66445 Jaapia argillacea JAAARDRAFT_66445 N
K443DRAFT_671578 Laccaria amethystina K443DRAFT_671578 N
K443DRAFT_672954 Laccaria amethystina K443DRAFT_672954 N
LACBIDRAFT_316437 Laccaria bicolor LACBIDRAFT_316437 N
M378DRAFT_103014 Amanita muscaria M378DRAFT_103014 N
M404DRAFT_141478 Pisolithus tinctorius M404DRAFT_141478 N
M404DRAFT_853889 Pisolithus tinctorius M404DRAFT_853889 N
M413DRAFT_170047 Hebeloma cylindrosporum M413DRAFT_170047 N
Moror_5897 Moniliophthora roreri Moror_5897 N
Moror_6337 Moniliophthora roreri Moror_6337 N
MPER_15625 Moniliophthora perniciosa MPER_15625 N
PAXRUDRAFT_316341 Paxillus rubicundulus PAXRUDRAFT_316341 N
PHACADRAFT_146309 Phanerochaete carnosa PHACADRAFT_146309 N
PHACADRAFT_262581 Phanerochaete carnosa PHACADRAFT_262581 N
PHLGIDRAFT_127046 Phlebiopsis gigantea PHLGIDRAFT_127046 N
PHLGIDRAFT_80941 Phlebiopsis gigantea PHLGIDRAFT_80941 N
PILCRDRAFT_672544 Piloderma croceum PILCRDRAFT_672544 N
PILCRDRAFT_821899 Piloderma croceum PILCRDRAFT_821899 N
PISMIDRAFT_674680 Pisolithus microcarpus PISMIDRAFT_674680 N
PISMIDRAFT_679206 Pisolithus microcarpus PISMIDRAFT_679206 N
PLEOSDRAFT_1104780 Pleurotus ostreatus PLEOSDRAFT_1104780 N
SCHCODRAFT_236631 Schizophyllum commune SCHCODRAFT_236631 N
SCHCODRAFT_81806 Schizophyllum commune SCHCODRAFT_81806 N
SCLCIDRAFT_1212689 Scleroderma citrinum SCLCIDRAFT_1212689 N
SCLCIDRAFT_1222770 Scleroderma citrinum SCLCIDRAFT_1222770 N
SERLA73DRAFT_163336 Serpula lacrymans SERLA73DRAFT_163336 N