CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK10012.1
(
Cannabis sativa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
PK10012.1
T144895_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFP5
M01851_2.00
Arabidopsis thaliana
DSWTNNNN
NNNNAWSH
PBM
Weirauch et al.(2014)
pTH7539
0.767
0.783
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK10012.1
C2H2 ZF
13
35
FVCDYCGREFNNSQALGGHQNAH
Links
Other
C2H2 ZF
family TFs
Other
Cannabis sativa
TFs
94 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bcin05g02510
Botrytis cinerea
Bcin05g02510
N
MBM_03899
Marssonina brunnea
MBM_03899
N
SBOR_0858
Sclerotinia borealis
SBOR_0858
N
SS1G_05834
Sclerotinia sclerotiorum
SS1G_05834
N
TRIATDRAFT_89089
Trichoderma atroviride
TRIATDRAFT_89089
N