PK23301.1 (Cannabis sativa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 PK23301.1 T144914_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STOP1
M06801_2.00 		Arabidopsis thaliana
CCTBCMCCAGDTRHHMCYY
RRGKDDYAHCTGGKGVAGG		 Dap-seq
OMalley et al.(2016)
STOP1_col_a 		0.827 0.956
STOP1
M06802_2.00 		Arabidopsis thaliana
RCCTNCMCCRGWWRN
NYWWCYGGKGNAGGY		 Dap-seq
OMalley et al.(2016)
STOP1_colamp_a 		0.827 0.956
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK23301.1 C2H2 ZF 360 382
PK23301.1 C2H2 ZF 381 412

Links

Other C2H2 ZF family TFs
Other Cannabis sativa TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1YGC6_PANPA Pan paniscus A1YGC6_PANPA D
Aan_R007044 Calypte anna Aan_R007044 I
Afo_R009341 Aptenodytes forsteri Afo_R009341 I
Alligator_sinensis_CCG021621.1 Alligator sinensis Alligator_sinensis_CCG021621.1 I
Cmyd_10021619 Chelonia mydas Cmyd_10021619 I
ENSAMEG00000008117 Ailuropoda melanoleuca ENSAMEG00000008117 I
ENSAPLG00000010675 Anas platyrhynchos ENSAPLG00000010675 I
ENSBTAP00000018594-D1 Bos grunniens ENSBTAP00000018594-D1 I
ENSCSAG00000015143 Chlorocebus sabaeus ENSCSAG00000015143 I
ENSFALG00000011755 Ficedula albicollis ENSFALG00000011755 I
ENSGGOG00000010051 Gorilla gorilla ENSGGOG00000010051 I
ENSGGOG00000027453 Gorilla gorilla ENSGGOG00000027453 I
ENSGMOG00000016036 Gadus morhua ENSGMOG00000016036 I
ENSLACG00000015675 Latimeria chalumnae ENSLACG00000015675 I
ENSLOCG00000016602 Lepisosteus oculatus ENSLOCG00000016602 I
ENSMPUG00000009805 Mustela putorius furo ENSMPUG00000009805 I
ENSNLEG00000013646 Nomascus leucogenys ENSNLEG00000013646 I
ENSOARG00000010848 Ovis aries ENSOARG00000010848 I
ENSONIG00000013281 Oreochromis niloticus ENSONIG00000013281 I
ENSP00000357979 Macaca fascicularis ENSP00000357979 I
ENSPANG00000016092 Papio anubis ENSPANG00000016092 I
ENSPFOG00000019532 Poecilia formosa ENSPFOG00000019532 I
ENSPPYG00000016893 Pongo abelii ENSPPYG00000016893 I
ENSPSIG00000006035 Pelodiscus sinensis ENSPSIG00000006035 I
ENSSHAG00000017854 Sarcophilus harrisii ENSSHAG00000017854 I
ENSSTOG00000007248 Ictidomys tridecemlineatus ENSSTOG00000007248 I
ENSXMAG00000003283 Xiphophorus maculatus ENSXMAG00000003283 I
Gfo_R016106 Geospiza fortis Gfo_R016106 I
NEMVEDRAFT_v1g114090 Nematostella vectensis NEMVEDRAFT_v1g114090 I
NR2E1 Tursiops truncatus ENSTTRG00000008863 I
NR2E1 Sorex araneus ENSSARG00000013555 I
NR2E1 Sus scrofa ENSSSCG00000004384 I
NR2E1 Tupaia belangeri ENSTBEG00000011676 I
NR2E1 Taeniopygia guttata ENSTGUG00000012147 I
nr2e1 Tetraodon nigroviridis ENSTNIG00000012282 I
nr2e1 Takifugu rubripes ENSTRUG00000001893 I
nr2e1 Gasterosteus aculeatus ENSGACG00000008934 I
nr2e1 Danio rerio ENSDARG00000017107 I
NR2E1 Cavia porcellus ENSCPOG00000000097 I
NR2E1 Callithrix jacchus ENSCJAG00000005966 I
NR2E1 Choloepus hoffmanni ENSCHOG00000007344 I
NR2E1 Canis familiaris ENSCAFG00000003761 I
NR2E1 Bos taurus ENSBTAG00000013991 I
nr2e1 Xenopus tropicalis XB-GENE-483554 I
Nr2e1 Mus musculus ENSMUSG00000019803 D
NR2E1 Homo sapiens ENSG00000112333 D
NR2E1 Loxodonta africana ENSLAFG00000013583 I
NR2E1 Felis catus ENSFCAG00000002255 I
NR2E1 Microcebus murinus ENSMICG00000014274 I
NR2E1 Myotis lucifugus ENSMLUG00000005543 I
NR2E1 Macaca mulatta ENSMMUG00000023767 I
NR2E1 Monodelphis domestica ENSMODG00000018005 I
NR2E1 Erinaceus europaeus ENSEEUG00000015193 I
NR2E1 Gallus gallus ENSGALG00000015305 I
Nr2e1 Rattus norvegicus ENSRNOG00000050550 I
NR2E1 Equus caballus ENSECAG00000018990 I
NR2E1 Ornithorhynchus anatinus ENSOANG00000000775 I
NR2E1 Dasypus novemcinctus ENSDNOG00000015478 I
NR2E1 Oryctolagus cuniculus ENSOCUG00000005853 I
NR2E1 Otolemur garnettii ENSOGAG00000011992 I
NR2E1 Anolis carolinensis ENSACAG00000005957 I
NR2E1 Ochotona princeps ENSOPRG00000012229 I
nr2e1 Oryzias latipes ENSORLG00000013426 I
NR2E1 Pan troglodytes ENSPTRG00000018472 I
NR2E1 Pteropus vampyrus ENSPVAG00000001731 I
nr2e1.S Xenopus laevis XB-GENE-864991 I
Ogr18563 Ophisaurus gracilis Ogr18563 I
Pvit_18941 Pogona vitticeps Pvit_18941 I
Sakowv30026672m.g Saccoglossus kowalevskii Sakowv30026672m.g I
SPU_008936 Strongylocentrotus purpuratus SPU_008936 I
SPU_027487 Strongylocentrotus purpuratus SPU_027487 I