Scas_Contig649.28 (Saccharomyces castellii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Scas_Contig649.28 T144956_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MSN4
M00032_2.00 		Saccharomyces cerevisiae
NYCCCYNN
NNRGGGRN		 PBM
Badis et al.(2008)
MSN4_2121 		0.816 0.935
MSN4
M07462_2.00 		Saccharomyces cerevisiae
CCCCT
AGGGG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0342.1 		0.816 0.935
MSN4
M08533_2.00 		Saccharomyces cerevisiae
CCCCT
AGGGG		 Misc
DeBoer et al.(2011)
YKL062W_518 		0.816 0.935
KLLA0_F26961g
M01039_2.00 		Kluyveromyces lactis
CYCCYTD
HARGGRG		 PBM
Siggers et al.(2014)
KLLA0F29691gKlac 		0.787 0.826
MSN2
M00036_2.00 		Saccharomyces cerevisiae
NVCCCCTK
MAGGGGBN		 PBM
Badis et al.(2008)
MSN2_2101 		0.781 0.761
MSN2
M07466_2.00 		Saccharomyces cerevisiae
CCCCY
RGGGG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0341.1 		0.781 0.761
MSN2
M08538_2.00 		Saccharomyces cerevisiae
NHYCCKN
NMGGRDN		 Misc
DeBoer et al.(2011)
YMR037C_1380 		0.781 0.761
MSN2
M10399_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MSN2_Q4 		0.781 0.761
CAGL0M13189g
M01034_2.00 		Candida glabrata
MYCCBBDNN
NNHVVGGRK		 PBM
Siggers et al.(2014)
CAGL0M13189gCgla 		0.768 0.870
CaO19.4752
M01035_2.00 		Candida albicans
VCCCCYDNNN
NNNHRGGGGB		 PBM
Siggers et al.(2014)
Msn4_orf19.4752Calb 		0.767 0.804
CAGL0F05995g
M01032_2.00 		Candida glabrata
NYCCYYNN
NNRRGGRN		 PBM
Siggers et al.(2014)
CAGL0F05995gCgla 		0.757 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig649.28 C2H2 ZF 673 696
Scas_Contig649.28 C2H2 ZF 702 724

Links

Other C2H2 ZF family TFs
Other Saccharomyces castellii TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
13440_YKL062W Saccharomyces mikatae 13440_YKL062W I 0.816
13715_YKL062W Saccharomyces paradoxus 13715_YKL062W I 0.816
14538_YKL062W Saccharomyces bayanus 14538_YKL062W I 0.792
16548_YMR037C Saccharomyces mikatae 16548_YMR037C I 0.781
17169_YMR037C Saccharomyces paradoxus 17169_YMR037C I 0.781
17588_YMR037C Saccharomyces bayanus 17588_YMR037C I 0.781
AACERI_AaceriABR089C Saccharomycetaceae sp ashbya aceri AACERI_AaceriABR089C I 0.787
AGOS_ABR089C Ashbya gossypii AGOS_ABR089C I 0.787
BN7_2125 Wickerhamomyces ciferrii BN7_2125 I 0.763
CAGL0F05995g Candida glabrata CAGL0F05995g D 0.757
CAGL0M13189g Candida glabrata CAGL0M13189g D 0.768
CaO19.12215 Candida albicans CaO19.12215 I 0.767
CaO19.4752 Candida albicans CaO19.4752 D 0.767
CD36_08440 Candida dubliniensis CD36_08440 I 0.767
Ecym_2301 Eremothecium cymbalariae Ecym_2301 I 0.787
KAFR_0A02320 Kazachstania africana KAFR_0A02320 I 0.805
KAFR_0F02070 Kazachstania africana KAFR_0F02070 I 0.797
KLLA0_F26961g Kluyveromyces lactis KLLA0_F26961g D 0.787
KLTH0D08734g Lachancea thermotolerans KLTH0D08734g I 0.787
KLTH0D08734g Kluyveromyces thermotolerans KLTH0D08734g I 0.787
KNAG_0H00550 Kazachstania naganishii KNAG_0H00550 I 0.805
KNAG_0M02310 Kazachstania naganishii KNAG_0M02310 I 0.757
Kpol_1013p21 Vanderwaltozyma polyspora Kpol_1013p21 I 0.781
Kpol_185p3 Vanderwaltozyma polyspora Kpol_185p3 I 0.805
Kwal_8351 Kluyveromyces waltii Kwal_8351 I 0.787
LALA0_S09e05358g Lachancea lanzarotensis LALA0_S09e05358g I 0.787
MSN2 Saccharomyces cerevisiae YMR037C D 0.781
MSN4 Saccharomyces cerevisiae YKL062W D 0.816
NCAS_0A12910 Naumovozyma castellii NCAS_0A12910 I 0.785
NCAS_0H03080 Naumovozyma castellii NCAS_0H03080 I 0.827
NDAI_0B01340 Naumovozyma dairenensis NDAI_0B01340 I 0.781
NDAI_0C00560 Naumovozyma dairenensis NDAI_0C00560 I 0.797
SAKL0B11330g Lachancea kluyveri SAKL0B11330g I 0.787
Scas_Contig649.29 Saccharomyces castellii Scas_Contig649.29 I 0.827
Scas_Contig709.32 Saccharomyces castellii Scas_Contig709.32 I 0.785
SKUD_158203 Saccharomyces kudriavzevii SKUD_158203 I 0.816
SU7_1995 Saccharomyces arboricola SU7_1995 I 0.816
SU7_2517 Saccharomyces arboricola SU7_2517 I 0.781
TBLA_0G01920 Tetrapisispora blattae TBLA_0G01920 I 0.787
TBLA_0H02830 Tetrapisispora blattae TBLA_0H02830 I 0.781
TDEL_0B06910 Torulaspora delbrueckii TDEL_0B06910 I 0.822
TPHA_0C02580 Tetrapisispora phaffii TPHA_0C02580 I 0.787
TPHA_0N01460 Tetrapisispora phaffii TPHA_0N01460 I 0.781
ZBAI_03527 Zygosaccharomyces bailii ZBAI_03527 I 0.822
ZBAI_08525 Zygosaccharomyces bailii ZBAI_08525 I 0.822
ZYRO0F01012g Zygosaccharomyces rouxii ZYRO0F01012g I 0.822