CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
e4f1.S
(
Xenopus laevis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XB-GENE-6018390
T145507_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAI67977
C2H2 ZF
9
31
YVCQLCDKTFKTANILRAHMITH
AAI67977
C2H2 ZF
37
59
FECKLCGNSFRTKGSLIRHNRRH
AAI67977
C2H2 ZF
65
86
YVCSKCGKSFRESGALTRHFRS
AAI67977
C2H2 ZF
127
149
LECPKCNTVCISANALSVHLKGH
AAI67977
C2H2 ZF
155
177
YTCEVCGREFLKRHLLRKHQECH
AAI67977
C2H2 ZF
183
205
YKCGECGKMYKTVAHVKGHMRVH
AAI67977
C2H2 ZF
211
233
YPCPKCGKRYKTKNAQQVHSRTH
AAI67977
C2H2 ZF
239
261
YVCQYCPNSFREKGSLVRHIRHH
AAI67977
C2H2 ZF
267
288
FKCHKCGRGFAEHGTLNRHLKT
Links
Other
C2H2 ZF
family TFs
Other
Xenopus laevis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA016861
Oryza indica
BGIOSGA016861
N
GRMZM2G427087
Zea mays
GRMZM2G427087
N
OB04G27370
Oryza brachyantha
OB04G27370
N
OGLUM04G20360
Oryza glumaepatula
OGLUM04G20360
N
ONIVA04G18650
Oryza nivara
ONIVA04G18650
N
OPUNC04G18070
Oryza punctata
OPUNC04G18070
N
ORGLA04G0174800
Oryza glaberrima
ORGLA04G0174800
N
ORUFI04G22010
Oryza rufipogon
ORUFI04G22010
N
Pavir.Ga00658
Panicum virgatum
Pavir.Ga00658
N
Pavir.J28088
Panicum virgatum
Pavir.J28088
N
Sb06g024110
Sorghum bicolor
Sb06g024110
N