CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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XP_002944155
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XP_002944155
T145885_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002944155
C2H2 ZF
102
124
FKCPYCSFSAMHQCILKRHMRSH
XP_002944155
C2H2 ZF
130
152
YPCEICGKKFTRREHMKRHTLVH
XP_002944155
C2H2 ZF
158
172
YVCKVCNRVFMSAAS
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30174.m008628
Ricinus communis
30174.m008628
N
0.000
AT2G46040
Arabidopsis thaliana
AT2G46040
N
0.000
Bo4g196010
Brassica oleracea
Bo4g196010
N
0.000
Bostr.25993s0166
Boechera stricta
Bostr.25993s0166
N
0.000
Cagra.0050s0094
Capsella grandiflora
Cagra.0050s0094
N
0.000
Carubv10022904m.g
Capsella rubella
Carubv10022904m.g
N
0.000
evm.TU.supercontig_214.10
Carica papaya
evm.TU.supercontig_214.10
N
0.000
F775_04400
Aegilops tauschii
F775_04400
N
0.000
gene31799-v1.0-hybrid
Fragaria vesca
gene31799-v1.0-hybrid
N
0.000
GRMZM2G365731
Zea mays
GRMZM2G365731
N
0.000
LPERR10G08380
Leersia perrieri
LPERR10G08380
N
0.000
MLOC_12524
Hordeum vulgare
MLOC_12524
N
0.000
OB10G19040
Oryza brachyantha
OB10G19040
N
0.000
Pavir.Ia01988
Panicum virgatum
Pavir.Ia01988
N
0.000
Pavir.Ib03139
Panicum virgatum
Pavir.Ib03139
N
0.000
PGSC0003DMG401012197
Solanum tuberosum
PGSC0003DMG401012197
N
0.000
Sb01g020470
Sorghum bicolor
Sb01g020470
N
0.000
Si038535m.g
Setaria italica
Si038535m.g
N
0.000
Thhalv10001382m.g
Eutrema salsugineum
Thhalv10001382m.g
N
0.000
Traes_2AS_6F531FBB5
Triticum aestivum
Traes_2AS_6F531FBB5
N
0.000
Traes_2BS_1E88E202F
Triticum aestivum
Traes_2BS_1E88E202F
N
0.000