17088_YMR182C (Saccharomyces mikatae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 17088_YMR182C T145934_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RGM1
M00037_2.00 		Saccharomyces cerevisiae
NCCCCTGR
YCAGGGGN		 PBM
Badis et al.(2008)
RGM1_2105 		0.797 0.978
RGM1
M07467_2.00 		Saccharomyces cerevisiae
CCCCT
AGGGG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0366.1 		0.797 0.978
RGM1
M08540_2.00 		Saccharomyces cerevisiae
CCCCT
AGGGG		 Misc
DeBoer et al.(2011)
YMR182C_531 		0.797 0.978
KTB10507.1
M01040_2.00 		Candida glabrata
NBCCCTKR
YMAGGGVN		 PBM
Siggers et al.(2014)
CAGL0L00583gCgla 		0.763 0.739
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
17088_YMR182C C2H2 ZF 19 44
17088_YMR182C C2H2 ZF 50 73

Links

Other C2H2 ZF family TFs
Other Saccharomyces mikatae TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL008339 Aedes aegypti AAEL008339 N
AAEL013855 Aedes aegypti AAEL013855 N
AAEL014429 Aedes aegypti AAEL014429 N
AALB000413 Anopheles albimanus AALB000413 N
AARA011017 Anopheles arabiensis AARA011017 N
AATE008052 Anopheles atroparvus AATE008052 N
ACOM023917 Anopheles coluzzii ACOM023917 N
ACOM023923 Anopheles coluzzii ACOM023923 N
ACUA008906 Anopheles culicifacies ACUA008906 N
ACUA010277 Anopheles culicifacies ACUA010277 N
ACUA018702 Anopheles culicifacies ACUA018702 N
ADIR010887 Anopheles dirus ADIR010887 N
AFAF008837 Anopheles farauti AFAF008837 N
AFAF020317 Anopheles farauti AFAF020317 N
Afo_R006476 Aptenodytes forsteri Afo_R006476 N
AFUN010571 Anopheles funestus AFUN010571 N
AMEC012899 Anopheles melas AMEC012899 N
ANCCAN_19748 Ancylostoma caninum ANCCAN_19748 N
AQUA000253 Anopheles quadriannulatus AQUA000253 N
ASTEI05183 Anopheles stephensi ASTEI05183 N
Bm6032 Brugia malayi Bm6032 N
Brh_R010942 Buceros rhinoceros Brh_R010942 N
BTMF_0001483201 Brugia timori BTMF_0001483201 N
CapteG168974 Capitella teleta CapteG168974 N
D918_04293 Trichuris suis D918_04293 N
DICVIV_06158 Dictyocaulus viviparus DICVIV_06158 N
ENSAPLG00000011274 Anas platyrhynchos ENSAPLG00000011274 N
ENSOANG00000006061 Ornithorhynchus anatinus ENSOANG00000006061 N
ENSTNIG00000016870 Tetraodon nigroviridis ENSTNIG00000016870 N
ENSTSYG00000009935 Tarsius syrichta ENSTSYG00000009935 N
EVEC_0000979001 Enterobius vermicularis EVEC_0000979001 N
GL25845 Drosophila persimilis FBgn0163429 I
HMEL012427 Heliconius melpomene HMEL012427 N
KGM_02028 Danaus plexippus KGM_02028 N
KGM_02040 Danaus plexippus KGM_02040 N
LCUP000434 Lucilia cuprina LCUP000434 N
nDi.2.2.2.g09029 Dirofilaria immitis nDi.2.2.2.g09029 N
nLs.2.1.2.g03773 Litomosoides sigmodontis nLs.2.1.2.g03773 N
OFLC_0000512101 Onchocerca flexuosa OFLC_0000512101 N
PHUM147760 Pediculus humanus PHUM147760 N
PHUM147770 Pediculus humanus PHUM147770 N
PPA25262 Pristionchus pacificus PPA25262 N
RPRC009188 Rhodnius prolixus RPRC009188 N
SBAD_0000643401 Soboliphyme baturini SBAD_0000643401 N
scaffold432-EXSNAP2012.9 Pristionchus exspectatus scaffold432-EXSNAP2012.9 N
SMUV_0000328301 Syphacia muris SMUV_0000328301 N
SPU_018392 Strongylocentrotus purpuratus SPU_018392 N
Tal_R007480 Tyto alba Tal_R007480 N
TBX15 Echinops telfairi ENSETEG00000017969 N
TBX15 Sus scrofa ENSSSCG00000006725 I
TBX15 Taeniopygia guttata ENSTGUG00000013355 N
TBX20 Sorex araneus ENSSARG00000003223 I
TBX6 Dasypus novemcinctus ENSDNOG00000034616 N
TC013513 Tribolium castaneum TC013513 N
TCLT_0000808101 Thelazia callipaeda TCLT_0000808101 N