CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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24535_YPL230W
(
Saccharomyces bayanus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
24535_YPL230W
T145962_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
USV1
M01538_2.00
Saccharomyces cerevisiae
NYCCCTKD
HMAGGGRN
PBM
Zhu et al.(2009)
Usv1
0.827
0.978
USV1
M00041_2.00
Saccharomyces cerevisiae
NCCCCTGD
HCAGGGGN
PBM
Badis et al.(2008)
YPL230W_2051
0.827
0.978
USV1
M08544_2.00
Saccharomyces cerevisiae
CCCCT
AGGGG
Misc
DeBoer et al.(2011)
YPL230W_509
0.827
0.978
KTB10507.1
M01040_2.00
Candida glabrata
NBCCCTKR
YMAGGGVN
PBM
Siggers et al.(2014)
CAGL0L00583gCgla
0.765
0.761
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
24535_YPL230W
C2H2 ZF
44
69
FKCTGYDGCAMSFTRAEHLARHIRKH
24535_YPL230W
C2H2 ZF
75
98
FQCPACLKFFSRVDNLKQHRESVH
Links
Other
C2H2 ZF
family TFs
Other
Saccharomyces bayanus
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Hinfp
Dipodomys ordii
ENSDORG00000001981
I
Hinfp
Mus musculus
ENSMUSG00000032119
D
HINFP
Sorex araneus
ENSSARG00000011633
I