CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

4284_YDR146C *(Saccharomyces paradoxus)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	4284_YDR146C	T145984_2.00	Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
SWI5 M00020_2.00	Saccharomyces cerevisiae	NNKGCTGGTHN	NDACCAGCMNN	PBM Badis et al.(2008) SWI5_2037	0.827	0.984
SWI5 M07450_2.00	Saccharomyces cerevisiae	KGCTGGKH	DMCCAGCM	PBM, CSA and or DIP-chip Mathelier et al.(2014) MA0402.1	0.827	0.984
SWI5 M08516_2.00	Saccharomyces cerevisiae	KGCTGGKH	DMCCAGCM	Misc DeBoer et al.(2011) YDR146C_569	0.827	0.984
ACE2 M00033_2.00	Saccharomyces cerevisiae	NTGCTGGBYN	NRVCCAGCAN	PBM Badis et al.(2008) ACE2_2082	0.797	0.889
ACE2 M07463_2.00	Saccharomyces cerevisiae	NGCTGGB	VCCAGCN	PBM, CSA and or DIP-chip Mathelier et al.(2014) MA0267.1	0.797	0.889
ACE2 M08534_2.00	Saccharomyces cerevisiae	NGCTGGBH	DVCCAGCN	Misc DeBoer et al.(2011) YLR131C_1332	0.797	0.889
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
4284_YDR146C	C2H2 ZF	550	574	FECLYPGCAKTFKRRYNIRSHIQTH
4284_YDR146C	C2H2 ZF	580	604	YSCDHPGCDKAFVRNHDLIRHKKSH
4284_YDR146C	C2H2 ZF	613	629	CGKKFNREDALVVHRSR

Links
Other C2H2 ZF family TFs
Other *Saccharomyces paradoxus* TFs