6354_YER130C (Saccharomyces mikatae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 6354_YER130C T145999_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
COM2
M00024_2.00 		Saccharomyces cerevisiae
VCCCCTDT
AHAGGGGB		 PBM
Badis et al.(2008)
YER130C_2103 		0.827 1.000
COM2
M01530_2.00 		Saccharomyces cerevisiae
YYYYKNWHN
NDWNMRRRR		 PBM
Zhu et al.(2009)
Yer130c 		0.827 1.000
COM2
M07454_2.00 		Saccharomyces cerevisiae
NCCCCTWTH
DAWAGGGGN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0423.1 		0.827 1.000
COM2
M08521_2.00 		Saccharomyces cerevisiae
NCCCCTWTH
DAWAGGGGN		 Misc
DeBoer et al.(2011)
YER130C_534 		0.827 1.000
KLLA0_C17072g
M01038_2.00 		Kluyveromyces lactis
CYCCTDDNN
NNHHAGGRG		 PBM
Siggers et al.(2014)
KLL0C17072gKlac 		0.771 0.804
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
6354_YER130C C2H2 ZF 388 411
6354_YER130C C2H2 ZF 417 439

Links

Other C2H2 ZF family TFs
Other Saccharomyces mikatae TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
6484_YER130C Saccharomyces paradoxus 6484_YER130C I 0.827
6723_YER130C Saccharomyces bayanus 6723_YER130C I 0.827
AACERI_AaceriACL057W Saccharomycetaceae sp ashbya aceri AACERI_AaceriACL057W I 0.792
AGOS_ACL057W Ashbya gossypii AGOS_ACL057W I 0.792
CAGL0K02145g Candida glabrata CAGL0K02145g I 0.803
COM2 Saccharomyces cerevisiae YER130C D 0.827
Ecym_8403 Eremothecium cymbalariae Ecym_8403 I 0.798
KAFR_0B02160 Kazachstania africana KAFR_0B02160 I 0.773
KLLA0_C17072g Kluyveromyces lactis KLLA0_C17072g D 0.771
KLTH0E06688g Lachancea thermotolerans KLTH0E06688g I 0.769
KLTH0E06688g Kluyveromyces thermotolerans KLTH0E06688g I 0.769
KNAG_0D02120 Kazachstania naganishii KNAG_0D02120 I 0.796
KNAG_0G01280 Kazachstania naganishii KNAG_0G01280 I 0.777
Kpol_1031p42 Vanderwaltozyma polyspora Kpol_1031p42 I 0.773
Kwal_17241 Kluyveromyces waltii Kwal_17241 I 0.774
LALA0_S01e12970g Lachancea lanzarotensis LALA0_S01e12970g I 0.779
NDAI_0B01930 Naumovozyma dairenensis NDAI_0B01930 I 0.801
NDAI_0G03420 Naumovozyma dairenensis NDAI_0G03420 I 0.761
SAKL0H24816g Lachancea kluyveri SAKL0H24816g I 0.798
SU7_0930 Saccharomyces arboricola SU7_0930 I 0.827
TDEL_0B04670 Torulaspora delbrueckii TDEL_0B04670 I 0.803
TPHA_0D01050 Tetrapisispora phaffii TPHA_0D01050 I 0.772
ZBAI_08232 Zygosaccharomyces bailii ZBAI_08232 I 0.781
ZYRO0G19140g Zygosaccharomyces rouxii ZYRO0G19140g I 0.797