CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_kg.C_2620004
(
Phytophthora capsici
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh1_kg.C_2620004
T146141_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_kg.C_2620004
C2H2 ZF
108
130
HECPTCNKQFRGRSELQNHIRTH
estExt_fgenesh1_kg.C_2620004
C2H2 ZF
136
160
LKCSYAGCTKRYAHSSNLRAHERTH
estExt_fgenesh1_kg.C_2620004
C2H2 ZF
166
190
YTCHYDGCGKSFAHSVSLKEHIWMH
estExt_fgenesh1_kg.C_2620004
C2H2 ZF
196
220
YVCPYEGCQKKFTQVSNFARHKKTH
Links
Other
C2H2 ZF
family TFs
Other
Phytophthora capsici
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG001391.4
Alligator sinensis
Alligator_sinensis_CCG001391.4
I
ENSAMEG00000014864
Ailuropoda melanoleuca
ENSAMEG00000014864
I
ENSBTAP00000026016-D1
Bos grunniens
ENSBTAP00000026016-D1
I
ENSECAG00000024341
Equus caballus
ENSECAG00000024341
I
ENSGACG00000014840
Gasterosteus aculeatus
ENSGACG00000014840
I
ENSGMOG00000001761
Gadus morhua
ENSGMOG00000001761
I
ENSNLEG00000007559
Nomascus leucogenys
ENSNLEG00000007559
I
ENSSHAG00000009478
Sarcophilus harrisii
ENSSHAG00000009478
I
ENSSTOG00000027842
Ictidomys tridecemlineatus
ENSSTOG00000027842
I
MAZ
Otolemur garnettii
ENSOGAG00000033940
I
MAZ
Sus scrofa
ENSSSCG00000025321
I
Maz
Rattus norvegicus
ENSRNOG00000055082
I
MAZ
Anolis carolinensis
ENSACAG00000014698
I
Maz
Mus musculus
ENSMUSG00000030678
D
MAZ
Homo sapiens
ENSG00000103495
D
MAZ
Cavia porcellus
ENSCPOG00000019886
I
Myotis_brandtii_MAZ_10014461
Myotis brandtii
Myotis_brandtii_MAZ_10014461
I
Pvit_12096
Pogona vitticeps
Pvit_12096
I