CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1.C_90917
(
Cryphonectria parasitica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_Genewise1.C_90917
T146186_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU04848
M01880_2.00
Neurospora crassa
NNCYCCRMNN
NNKYGGRGNN
PBM
Weirauch et al.(2014)
pTH8844
0.787
0.848
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1.C_90917
C2H2 ZF
30
52
LPCRFCDKWFRRVEHVQRHERTH
estExt_Genewise1.C_90917
C2H2 ZF
58
83
FACTWDSCGKSFGRRDLLVRHEKLVH
Links
Other
C2H2 ZF
family TFs
Other
Cryphonectria parasitica
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_027780
Acremonium chrysogenum
ACRE_027780
I
0.781
BBA_05373
Beauveria bassiana
BBA_05373
I
0.805
CSUB01_05150
Colletotrichum sublineola
CSUB01_05150
I
0.805
CTHT_0043110
Chaetomium thermophilum
CTHT_0043110
I
0.805
estExt_fgenesh2_pg.C_60206
Neurospora discreta
estExt_fgenesh2_pg.C_60206
I
0.787
F503_06706
Ophiostoma piceae uamh
F503_06706
I
0.805
FFUJ_06078
Fusarium fujikuroi
FFUJ_06078
I
0.781
FGRRES_17038
Fusarium graminearum
FGRRES_17038
I
0.781
FOXG_03231
Fusarium oxysporum
FOXG_03231
I
0.781
FPSE_05649
Fusarium pseudograminearum
FPSE_05649
I
0.781
FVEG_02103
Fusarium verticillioides
FVEG_02103
I
0.781
GGTG_00802
Gaeumannomyces graminis
GGTG_00802
I
0.790
GLRG_08853
Colletotrichum graminicola
GLRG_08853
I
0.805
MGG_00660
Magnaporthe oryzae
MGG_00660
I
0.786
MYCTH_2307033
Myceliophthora thermophila
MYCTH_2307033
I
0.805
NCU04848
Neurospora crassa
NCU04848
D
0.787
S40285_04805
Stachybotrys chlorohalonata
S40285_04805
I
0.781
S40288_06433
Stachybotrys chartarum
S40288_06433
I
0.781
THITE_2110415
Thielavia terrestris
THITE_2110415
I
0.805
TRIATDRAFT_131482
Trichoderma atroviride
TRIATDRAFT_131482
I
0.805
TRIVIDRAFT_190729
Trichoderma virens
TRIVIDRAFT_190729
I
0.781
VHEMI06807
Torrubiella hemipterigena
VHEMI06807
I
0.786
X797_000582
Metarhizium robertsii
X797_000582
I
0.786