CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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EuGene3000845
(
Heterobasidion annosum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
EuGene3000845
T146205_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCHCODRAFT_110420
M01458_2.00
Schizophyllum commune
VCGCCACNNN
NNNGTGGCGB
PBM
Najafabadi et al.(2015a)
pTH10238
0.821
0.911
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EuGene3000845
C2H2 ZF
151
173
YACDMCALSFNRQHDLKRHRETH
EuGene3000845
C2H2 ZF
179
201
FLCNGGCGKTFTRKDALKRHQLV
Links
Other
C2H2 ZF
family TFs
Other
Heterobasidion annosum
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MCYG_04546
Arthroderma otae
MCYG_04546
N
MGYG_03433
Microsporum gypseum
MGYG_03433
N