ACUA005738 (Anopheles culicifacies)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 ACUA005738 T147880_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gl
M03671_2.00 		Drosophila melanogaster
RTTACCATACAAGTGCAV
BTGCACTTGTATGGTAAY		 SELEX
Nitta et al.(2015)
gl_1 		0.823 0.974
gl
M06078_2.00 		Drosophila melanogaster
DAYNCWTBAAAT
ATTTVAWGNRTH		 B1H
Zhu et al.(2011)
gl_FlyReg_FBgn0004618 		0.823 0.974
gl
M06079_2.00 		Drosophila melanogaster
TTRTABGGYTTC
GAARCCVTAYAA		 B1H
Zhu et al.(2011)
gl_SANGER_5_FBgn0004618 		0.823 0.974
gl
M06080_2.00 		Drosophila melanogaster
NNBDWNTADGGCTTC
GAAGCCHTANWHVNN		 B1H
Zhu et al.(2011)
gl_SOLEXA_5_FBgn0004618 		0.823 0.974
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACUA005738-PA C2H2 ZF 484 505
ACUA005738-PA C2H2 ZF 511 533
ACUA005738-PA C2H2 ZF 539 561
ACUA005738-PA C2H2 ZF 567 589
ACUA005738-PA C2H2 ZF 595 617

Links

Other C2H2 ZF family TFs
Other Anopheles culicifacies TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA012660 Oryza indica BGIOSGA012660 N
BRADI1G61810 Brachypodium distachyon BRADI1G61810 N
F775_14666 Aegilops tauschii F775_14666 N
GRMZM2G157716 Zea mays GRMZM2G157716 N
GRMZM2G168665 Zea mays GRMZM2G168665 N
LPERR03G15750 Leersia perrieri LPERR03G15750 N
MLOC_6239 Hordeum vulgare MLOC_6239 N
OBART03G18090 Oryza barthii OBART03G18090 N
OGLUM03G18670 Oryza glumaepatula OGLUM03G18670 N
OMERI03G16300 Oryza meridionalis OMERI03G16300 N
ONIVA03G19010 Oryza nivara ONIVA03G19010 N
OPUNC03G17310 Oryza punctata OPUNC03G17310 N
ORUFI03G18850 Oryza rufipogon ORUFI03G18850 N
OS03G0360600 Oryza sativa OS03G0360600 N
Si036723m.g Setaria italica Si036723m.g N
Traes_1AS_74E6A4EC7 Triticum aestivum Traes_1AS_74E6A4EC7 N
Traes_4BS_1729D563E Triticum aestivum Traes_4BS_1729D563E N
Traes_4BS_4D4146347 Triticum aestivum Traes_4BS_4D4146347 N
Traes_4DL_54206FBF3 Triticum aestivum Traes_4DL_54206FBF3 N
Traes_4DL_54206FBF31 Triticum aestivum Traes_4DL_54206FBF31 N
TRIUR3_32728 Triticum urartu TRIUR3_32728 N