AMEC006880 (Anopheles melas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 AMEC006880 T149312_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
odd
M03667_2.00 		Drosophila melanogaster
WGCTACCGGTAGCH
DGCTACCGGTAGCW		 SELEX
Nitta et al.(2015)
odd_1 		0.790 0.946
odd
M06467_2.00 		Drosophila melanogaster
BTGCTACTGKD
HMCAGTAGCAV		 B1H
Mathelier et al.(2014)
MA0454.1 		0.790 0.946
odd
M06058_2.00 		Drosophila melanogaster
BTGCTACTGKD
HMCAGTAGCAV		 B1H
Zhu et al.(2011)
odd_NAR_FBgn0002985 		0.790 0.946
odd
M06059_2.00 		Drosophila melanogaster
GCTWCYGDW
WHCRGWAGC		 B1H
Zhu et al.(2011)
odd_NBT_1.5_FBgn0002985 		0.790 0.946
odd
M06060_2.00 		Drosophila melanogaster
GCTACYGKD
HMCRGTAGC		 B1H
Zhu et al.(2011)
odd_NBT_2.5_FBgn0002985 		0.790 0.946
odd
M06061_2.00 		Drosophila melanogaster
GCTACTGKD
HMCAGTAGC		 B1H
Zhu et al.(2011)
odd_NBT_5_FBgn0002985 		0.790 0.946
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AMEC006880-PA C2H2 ZF 32 54
AMEC006880-PA C2H2 ZF 60 82
AMEC006880-PA C2H2 ZF 88 110
AMEC006880-PA C2H2 ZF 116 138

Links

Other C2H2 ZF family TFs
Other Anopheles melas TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL007450 Aedes aegypti AAEL007450 I 0.825
AATE006351 Anopheles atroparvus AATE006351 I 0.827
ACOM030734 Anopheles coluzzii ACOM030734 I 0.827
ACUA009853 Anopheles culicifacies ACUA009853 I 0.827
ADAC003639 Anopheles darlingi ADAC003639 I 0.827
AFAF010941 Anopheles farauti AFAF010941 I 0.825
AFUN006321 Anopheles funestus AFUN006321 I 0.827
AMAM023036 Anopheles maculatus AMAM023036 I 0.827
AMEC015679 Anopheles melas AMEC015679 I 0.827
AMEM014670 Anopheles merus AMEM014670 I 0.827
AQUA000694 Anopheles quadriannulatus AQUA000694 I 0.827
ASTEI01737 Anopheles stephensi ASTEI01737 I 0.827
CPIJ010649 Culex quinquefasciatus CPIJ010649 I 0.820
CpipJ_CPIJ010649 Culex pipiens CpipJ_CPIJ010649 I 0.820
GA17731 Drosophila pseudoobscura FBgn0077741 I 0.790
GD22743 Drosophila simulans FBgn0194139 I 0.790
GE14830 Drosophila yakuba FBgn0232422 I 0.790
GF14661 Drosophila ananassae FBgn0091688 I 0.790
GG24424 Drosophila erecta FBgn0116556 I 0.790
GH13191 Drosophila grimshawi FBgn0120668 I 0.787
GI17766 Drosophila mojavensis FBgn0140507 I 0.787
GJ17592 Drosophila virilis FBgn0204762 I 0.787
GK15475 Drosophila willistoni FBgn0217480 I 0.790
GM18135 Drosophila sechellia FBgn0173042 I 0.790
LCUP002076 Lucilia cuprina LCUP002076 I 0.782
LLOJ001734 Lutzomyia longipalpis LLOJ001734 I 0.820
MDOA000040 Musca domestica MDOA000040 I 0.782
MDOA004014 Musca domestica MDOA004014 I 0.782
MDOA008133 Musca domestica MDOA008133 I 0.782
MESCA009141 Megaselia scalaris MESCA009141 I 0.768
odd Drosophila melanogaster FBgn0002985 D 0.790
ODDA Anopheles gambiae AGAP007972 I 0.827
ODDB Anopheles gambiae AGAP012585 I 0.827