BGLB012448 (Biomphalaria glabrata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 BGLB012448 T150830_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gl
M03671_2.00 		Drosophila melanogaster
RTTACCATACAAGTGCAV
BTGCACTTGTATGGTAAY		 SELEX
Nitta et al.(2015)
gl_1 		0.804 0.904
gl
M06078_2.00 		Drosophila melanogaster
DAYNCWTBAAAT
ATTTVAWGNRTH		 B1H
Zhu et al.(2011)
gl_FlyReg_FBgn0004618 		0.804 0.904
gl
M06079_2.00 		Drosophila melanogaster
TTRTABGGYTTC
GAARCCVTAYAA		 B1H
Zhu et al.(2011)
gl_SANGER_5_FBgn0004618 		0.804 0.904
gl
M06080_2.00 		Drosophila melanogaster
NNBDWNTADGGCTTC
GAAGCCHTANWHVNN		 B1H
Zhu et al.(2011)
gl_SOLEXA_5_FBgn0004618 		0.804 0.904
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGLB012448-PA C2H2 ZF 520 541
BGLB012448-PA C2H2 ZF 547 569
BGLB012448-PA C2H2 ZF 575 597
BGLB012448-PA C2H2 ZF 603 625
BGLB012448-PA C2H2 ZF 631 653

Links

Other C2H2 ZF family TFs
Other Biomphalaria glabrata TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT5G16100 Arabidopsis thaliana AT5G16100 N
Bo9g163480 Brassica oleracea Bo9g163480 N
Bostr.10273s0444 Boechera stricta Bostr.10273s0444 N
Bostr.2902s0345 Boechera stricta Bostr.2902s0345 N
Bra008646 Brassica rapa Bra008646 N
Carubv10027922m.g Capsella rubella Carubv10027922m.g N