CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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csin109333
(
Clonorchis sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
csin109333
T152679_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
csin109333
C2H2 ZF
609
631
YECNVCQKTFGQLSNLKVHLRTH
csin109333
C2H2 ZF
637
659
FKCNLCDKGFTQLAHLQKHNLVH
csin109333
C2H2 ZF
665
687
HQCLVCQKRFSSTSNLKTHMRLH
csin109333
C2H2 ZF
693
715
FACKTCEVSFSQYIHLKLHRRLH
csin109333
C2H2 ZF
721
742
FICPKCHLKFPKPADLKQHWIT
Links
Other
C2H2 ZF
family TFs
Other
Clonorchis sinensis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA026934
Oryza indica
BGIOSGA026934
N
LPERR08G12970
Leersia perrieri
LPERR08G12970
N
OB08G23190
Oryza brachyantha
OB08G23190
N
OBART08G15710
Oryza barthii
OBART08G15710
N
OGLUM08G16460
Oryza glumaepatula
OGLUM08G16460
N
OLONG_004505
Oryza longistaminata
OLONG_004505
N
OMERI08G13000
Oryza meridionalis
OMERI08G13000
N
ONIVA08G16830
Oryza nivara
ONIVA08G16830
N
OPUNC08G13780
Oryza punctata
OPUNC08G13780
N
ORUFI08G17620
Oryza rufipogon
ORUFI08G17620
N
OS08G0433500
Oryza sativa
OS08G0433500
N
Sb07g021200
Sorghum bicolor
Sb07g021200
N